Return to main results Retrieve Phyre Job Id

Job DescriptionQ00037
Confidence17.95%DateThu Jan 5 12:33:19 GMT 2012
Rank32Aligned Residues40
% Identity13%Templated1a04a1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110......
Predicted Secondary structure 









Query SS confidence 









































Query Sequence  GVQHFVAVQLNIHRPEVLSRYAERDTTLREHTALIKEYYGYH
Query Conservation   

  

 

 
        
  
  
   
   

  

 
Alig confidence 







..































Template Conservation   

  
  ..
 
  


  
 

  

      
  

 
 
Template Sequence  DILKLIAQ. . GLPNKMIARRLDITESTVKVHVKHMLKKMKLK
Template Known Secondary structure  T..T

T

T

Template Predicted Secondary structure 
..








Template SS confidence 









































   162....... 170.........180.........190.........200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions