Job Description Q00037 Confidence 12.97% Date Thu Jan 5 12:33:19 GMT 2012 Rank 55 Aligned Residues 58 % Identity 19% Template c3jroC_ PDB info PDB header:transport protein, structural protein Chain: C: PDB Molecule:nucleoporin nup84; PDBTitle: nup84-nup145c-sec13 edge element of the npc lattice Resolution 4.00 Å

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		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	R	L	V	Y	D	A	E	G	R	I	Q	R	A	G	Y	S	L	C	L	L	E	R	L	Q	D	A	L	R	R	R	D	I	W	L	E	N	S	D	R	W	G	D	P	R	E	K	L	L	Q	G	E	E	W	Q	T	Q	R	I	P	V	C	R	A
Query Conservation
Alig confidence																											.	.	.	.	.																				.	.
Template Conservation																											.	.	.	.	.																				.	.
Template Sequence		W	R	R	T	V	Y	S	L	S	Q	Q	A	G	L	D	P	Y	E	R	A	I	Y	S	Y	L	.	.	.	.	.	S	G	A	I	P	N	Q	E	V	L	Q	Y	S	D	W	E	S	D	L	.	.	H	I	H	L	N	Q	I	L	Q	T	E	I	E	N
Template Known Secondary structure											T	T		S	S												.	.	.	.	.			S				G	G	G		S			S	S					.	.
Template Predicted Secondary structure																											.	.	.	.	.																				.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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