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Job DescriptionQ00037
Confidence10.25%DateThu Jan 5 12:33:19 GMT 2012
Rank85Aligned Residues48
% Identity31%Templatec3bvhC_
PDB info PDB header:blood clottingChain: C: PDB Molecule:fibrinogen gamma chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   687..690......... 700..... ....710.........720.........730...
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Query Sequence  ASADGMRFVTPVK. . . . . . . . . . . . . . . . . . . . . . . . . TINSGS. . . . . . . . NRKYFGSGRGITWYNFVSDQYSGFHGIV
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Template Sequence  TSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYANGIIWATWKTRWYSMKKTTM
Template Known Secondary structure  T

TT


BBTTB

SSSSS
TS
B

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STTSB

TTSB

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   305....310.........320.........330.........340.........350.........360.........370.........380....
 
   734
Predicted Secondary structure 
Query SS confidence 
Query Sequence  V
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   385
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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