Return to main results Retrieve Phyre Job Id

Job DescriptionQ00037
Confidence40.08%DateThu Jan 5 12:33:19 GMT 2012
Rank6Aligned Residues40
% Identity20%Templatec2w36B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:endonuclease v; PDBTitle: structures of endonuclease v with dna reveal initiation of2 deaminated adenine repair
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   739740.........750.........760.........770. ........780
Predicted Secondary structure 












.

Query SS confidence 
































.








Query Sequence  RDSIFVLEGLLEQQTGLNPVEIMTDTAGSSDII. FGLFWLLGY
Query Conservation   

  





   
         



 
   .


  


 
Alig confidence 















..














.








Template Conservation 

 
  
 

  
   ..







 
  



 


 



Template Sequence  REGPLFLKAWEKLRTK. . PDVVVFDGQGLAHPRKLGIASHMGL
Template Known Secondary structure 

S
..
SS
SSSSTTS

Template Predicted Secondary structure 



..









Template SS confidence 










































   88.90.........100... ......110.........120........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions