Phyre 2 alignment of Q00037 with c2hpcF

Job Description Q00037
Confidence 11.08% Date Thu Jan 5 12:33:19 GMT 2012

Rank 70 Aligned Residues 34

% Identity 38% Template c2hpcF_

PDB info PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide.

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	687	.	.	690	.	.	.	.	.	.	.	.	.																										700	.	.	.	.	.	.	.	.									.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence	A	S	A	D	G	M	R	F	V	T	P	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	N	S	G	S	N	R	K	.	.	.	.	.	.	.	.	Y	F	G	S	G	R	G	I	T	W	Y	N
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	T	S	H	N	G	M	Q	F	S	T	W	D	N	D	N	D	K	F	E	G	N	C	A	E	Q	D	G	S	G	W	W	M	N	K	C	H	A	G	H	L	N	G	V	Y	Y	Q	G	G	T	Y	S	K	A	S	T	P	N	G	Y	D	N	G	I	I	W	A	T
Template Known Secondary structure	S	B		T	T						T	T	B			S	S	S	S	S		T	T	T	T	T	T	S					S	S	S		S	B		T	T	S	B			T	T	S				T	T	T		S	S	S	S			B	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
	305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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