Job Description Q00037 Confidence 13.27% Date Thu Jan 5 12:33:19 GMT 2012 Rank 51 Aligned Residues 136 % Identity 13% Template c1dvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction Resolution 2.00 Å

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		806	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.				850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.				.	870	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.																				.	.	.
Query SS confidence																																														.	.	.																				.	.	.
Query Sequence		L	D	K	L	A	R	G	Y	A	D	L	S	K	A	E	S	Q	W	D	E	M	M	R	T	A	G	S	L	K	L	G	T	I	H	A	S	E	L	I	R	S	L	L	K	.	.	.	S	S	R	P	S	G	L	A	Q	A	I	M	E	V	G	R	V	N	K	.	.	.	T	L	Y	L	L	N	Y	I	D	D	E
Query Conservation																																														.	.	.																				.	.	.
Alig confidence																																														.	.	.																				.	.	.
Template Conservation
Template Sequence		F	C	K	N	L	E	N	A	T	S	H	L	R	L	E	P	D	W	P	S	I	L	L	I	C	D	E	I	N	Q	K	D	V	T	P	K	N	A	F	A	A	I	K	K	K	M	N	S	P	N	P	H	S	S	C	Y	S	L	L	V	L	E	S	I	V	K	N	C	G	A	P	V	H	E	E	V	F	T	K	E
Template Known Secondary structure												T	T		S	S															T	T	S	S														T		S	S																		S									S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.									940	.	.	.	.	.	.	.	.	.	950	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.
Query Sequence		D	Y	R	R	R	I	L	T	Q	L	N	R	G	E	G	R	H	A	V	A	R	A	I	C	Y	G	Q	R	G	E	I	R	K	R	Y	R	E	G	Q	E	D	Q	L	G	A	L	G	L	V	T	N	A	V	V	L	W	N	T	L	Y	.	.	.	.	.	.	.	.	M	E	E	A	L	S	W	M	R	R	N	G
Query Conservation																																																														.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		N	C	E	M	F	S	S	F	L	E	S	T	P	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	R	Q	K	M	L	E	L	V	Q	T	.	.	.	.	W	A	Y	A	F	R	S	S	D	K	Y	Q	A	I	K	D	T	M	T	I	L	K	A	K	G
Template Known Secondary structure														S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.					T	T	T		S	S														T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100																									.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		952	.	.	.			.	.	.	.	960	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		E	E	I	I	.	.	D	E	D	I	A	R	L	S	P	L	M	H	G	H
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		H	T	F	P	E	L	R	E	M	F	T	A	D	T	A	P	N	W	A	D
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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