Job Description P0ABN9 Confidence 6.60% Date Thu Jan 5 11:15:58 GMT 2012 Rank 91 Aligned Residues 224 % Identity 13% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		F	Y	G	A	R	K	G	G	I	A	L	G	L	L	G	G	I	G	L	V	I	L	V	F	V	F	H	L	.	Q	P	G	K	P	P	V	D	V	M	L	V	I	I	A	V	V	A	A	S	A	T	L	Q	A	S	G	G	L	D	V	M	L	Q	I	A	E	K	L	L	R	R	N	P	K	Y	V	S	I	V	A
Query Conservation																														.
Alig confidence																														.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	N	T	L	T
Template Known Secondary structure																																T	T	T	T	T	T	T	T	T	T																T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.																		.	390	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	V	T	C	T	L	T	I	L	C	G	T	G	H	V	V	Y	T	I	L	P	I	I	Y	D	V	A	I	K	N	N	I	R	P	E	R	P	M	A	A	S	S	I	G	A	Q	M	G	I	I	A	S	P	V	S	V	A	V	V	S	L	V	A	M	L	G	N	V	T	F	D	G	R	H	L	E	F	L	D
Query Conservation
Alig confidence		.																						.																																														.	.	.	.
Template Conservation		.																						.																																														.	.	.	.
Template Sequence		.	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	.	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	.	.	.	.	G	S	T	G	A	I	Y	R
Template Known Secondary structure		.																						.								T				S							T																T	T	T	S	T	T	T	T				.	.	.	.	G	G	G
Template Predicted Secondary structure		.																						.																																														.	.	.	.
Template SS confidence
			395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460					.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	I	T	I	P	S	T	L	I	G	I	L	A	I	G	I	F	S	W	F	R	G	K	D	L	D	K	D	E	E	F	Q	K	F	I	S	V	P	E	N	R	E	Y	V	Y	G	D	T	A	T	L	L	D	K	K	L	P	K	S	N	W	L	A	M	W	I	F	L	G	A	I	A	V	V	A	L	L	G
Query Conservation
Alig confidence																																																											.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T	M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H	H	Y	T	D	S	V	G	G	I	L	R	S	T	G	.	.	.	.	R	Y	L	V	L	Y	L	I	I	V	V	G	M	A	Y	L	F	V	R
Template Known Secondary structure																		T	T	T									S															T															.	.	.	.																			S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	S	D	L	R	P	S	F	G	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	S	S	F	L	P	D	E	D	Q	G
Template Known Secondary structure		S		B		S	S						S
Template Predicted Secondary structure
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions