Job Description P0A9H9 Confidence 34.50% Date Thu Jan 5 11:10:17 GMT 2012 Rank 7 Aligned Residues 122 % Identity 15% Template d1szia_ SCOP info Four-helical up-and-down bundle Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain Resolution 2.80

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	M	L	R	D	S	L	R	E	L	G	L	D	Q	A	I	A	E	A	A	E	A	I	P	D	A	R	D	R	L	Y	Y	V	V	Q	M	T	A	Q	A	A	E	R	A	L	N	S	V	E	A	.	S	Q	P	H	Q	D	Q	M	E	K	S	A	K	A	L	T	Q	R	W	D	D	W	F	A	D	P	I	D	L
Query Conservation																																																				.
Alig confidence										.	.	.	.	.	.																																					.																												.	.
Template Conservation										.	.	.	.	.	.																																																																	.	.
Template Sequence		H	A	Y	E	H	S	L	G	.	.	.	.	.	.	K	L	Q	N	A	R	Q	K	A	Q	E	T	L	Q	Q	L	T	S	V	L	G	L	M	E	S	V	K	Q	A	K	P	E	Q	V	E	A	R	A	L	S	M	F	R	D	I	T	Q	Q	L	Q	S	M	C	V	A	L	G	A	S	I	Q	G	L	P	.	.
Template Known Secondary structure										.	.	.	.	.	.																															S																												T	T	T	T	S		.	.
Template Predicted Secondary structure										.	.	.	.	.	.																																																																	.	.
Template SS confidence
		253	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		A	D	A	R	E	L	V	T	D	T	R	Q	F	L	A	D	V	P	A	H	T	S	F	T	N	A	Q	L	L	E	I	M	M	A	Q	D	F	Q	D	L	T	G	Q	.	.	.	.	.	.	.	V	I	K	R	M	M	D	V	I	Q	E	I	E	R	Q	L	L	M
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	S	H	V	R	E	Q	A	Q	Q	A	R	S	Q	V	N	D	L	Q	A	T	F	S	G	I	H	S	F	Q	D	L	S	A	G	V	L	A	Q	T	R	E	R	I	A	R	A	R	E	A	L	D	N	T	V	E	Y	V	A	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																					G	G	G			S	G	G	G																													T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions