Job Description P0A9H9 Confidence 2.99% Date Thu Jan 5 11:10:17 GMT 2012 Rank 86 Aligned Residues 147 % Identity 12% Template d1eq1a_ SCOP info Apolipophorin-III Apolipophorin-III Apolipophorin-III Resolution UNK

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.														.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.														.	.	.	.	.	.	.	.
Query Sequence		P	A	D	E	H	S	A	G	D	I	I	A	R	I	G	S	L	T	R	M	L	R	D	S	L	R	E	L	G	L	D	Q	A	I	A	E	A	A	E	A	I	P	D	A	R	.	.	.	.	D	R	L	Y	Y	V	V	Q	M	T	A	Q	A	.	.	.	.	.	.	.	.	A	E	R	A	L	N	S	V	E	A
Query Conservation																																															.	.	.	.														.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	G	G	N	A	F	E	E	M	E	K	H	A	K	E	F	Q	K	T	F	S	E	Q	F	N	S	L	V	N	S	K	N	T	Q	D	F	N	K	A	L	K	D	G	S	D	S	V	L	Q	Q	L	S	A	F	S	S	S	L	Q	G	A	I	S	D	A	N	G	K	A	K	E	A	L	E	Q	A	R	Q	N
Template Known Secondary structure		S	S	S				S	T																					T	S	S			S	S		S	S																										T	T		S	S	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	P	H	Q	D	Q	M	E	K	S	A	K	A	L	T	Q	R	W	D	D	W	F	A	D	P	I	D	L	A	D	A	R	E	L	V	T	D	T	R	Q	F	L	A	D	V	P	A	H	T	S	F	T	N	A	Q	L	L	E	I	M	M	A	Q	D	F	Q	D	L	T	G	Q	V	I	K	R	M	M	D	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation																				.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		V	E	K	T	A	E	E	L	R	K	A	H	P	D	V	E	K	E	.	.	.	.	.	.	.	.	.	A	N	A	F	K	D	K	L	Q	A	A	V	Q	T	T	V	Q	E	S	Q	K	L	A	K	E	V	A	S	N	M	E	E	T	N	K	K	L	A	P	K	.	.	I	K	Q	A	Y	D	D	F	V	K	H
Template Known Secondary structure								G	G	G	G		S						T	.	.	.	.	.	.	.	.	.		S	S	S																								S				S	S		G	G	G				.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.
		156	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	E	I	E	R	Q	L	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	V	Q	K	K	L	H	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions