Job Description P15977 Confidence 95.06% Date Thu Jan 5 11:34:58 GMT 2012 Rank 67 Aligned Residues 172 % Identity 15% Template d2fhfa5 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.65

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		353	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.								.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure														.																																												.	.	.	.	.	.	.
Query SS confidence														.																																												.	.	.	.	.	.	.
Query Sequence		S	Q	F	A	A	C	W	E	I	S	Q	G	.	Y	E	M	P	I	G	L	Y	R	D	L	A	V	G	V	A	E	G	G	A	E	T	W	C	D	R	E	L	Y	C	L	K	A	S	V	G	A	P	P	D	I	L	G	.	.	.	.	.	.	.	P	L	G	Q	N	W	G	L	P	P	M	D	P	H	I	I	T
Query Conservation														.																																												.	.	.	.	.	.	.
Alig confidence														.						.	.												.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																				.	.												.	.	.	.	.	.
Template Sequence		K	E	F	R	T	M	I	Q	A	I	K	Q	D	L	G	M	N	V	.	.	I	M	D	V	V	Y	N	H	T	N	A	.	.	.	.	.	.	A	G	P	T	D	R	T	S	V	L	D	K	I	V	P	W	Y	Y	Q	R	L	N	E	T	T	G	S	V	E	S	A	T	C	C	S	D	S	A	P	E	H	R	M
Template Known Secondary structure														T	S					.	.						T	T			S		.	.	.	.	.	.		S	S	S		T	T							S	T	T	T	S	B		B		T	T	T			B			T	T	S	S			B		T	T	S
Template Predicted Secondary structure																				.	.												.	.	.	.	.	.
Template SS confidence
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.			600	.	.	.	.	.	.	.	.	.	610							.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.			.	.	.	500
Predicted Secondary structure																	.		.																																																									.	.
Query SS confidence																	.		.																																																									.	.
Query Sequence		A	R	A	Y	E	P	F	I	E	L	L	R	A	N	M	.	Q	.	N	C	G	A	L	R	I	D	H	V	M	S	M	L	R	L	W	W	I	P	Y	G	E	T	A	D	Q	G	A	Y	V	H	Y	P	V	D	D	L	L	S	I	L	A	L	E	S	K	R	H	R	C	M	V	I	G	E	.	.	D	L	G	T
Query Conservation																	.		.																																																									.	.
Alig confidence						.	.										.		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.															.	.
Template Conservation						.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		F	A	K	L	.	.	I	A	D	S	L	A	V	W	T	T	D	Y	K	I	D	G	F	R	F	D	L	M	L	Y	H	P	K	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	S	A	W	E	.	.	R	I	K	A	L	N	P	D	I	Y	F	F	G	E	G	W	D	S	N	Q
Template Known Secondary structure						.	.																				T	T	G	G	G	S	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.				T	T		T	T											S
Template Predicted Secondary structure						.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		654	.	.	.			.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.																		.	.	.	690	.	.			.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
		501	.																				.	.	.	.	.	.	.	510	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	V	G	K	L	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	R	F	E	I	A	S	Q	I	N	L	K	G	T	G	I	G	T	F	S	D	R	L	R	D	A	V	R	G	G	G	P	F	D	S	G	D	A	L	R	Q	N	Q	G	V	G	S	G	A	G	V	L	P	N	E	L	T	T	L	S	D	D	Q	A	R	H	L	A	D	L	T	R	L	G	M	A	G	N	L
Template Known Secondary structure		T	T	T	S		B			T	T	T	T	T	T	S	S															S		T	T			T	T								G	G	G	T	T	T	T	S			S	S																				T	T		B
Template Predicted Secondary structure
Template SS confidence
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
							512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	S	G	V	Y	S	Y	K	V	L	Y	F	E	N	D	H	E	K	T	F	R	A	P	K	A	Y	P	E	Q	S	M	A	V	A	A	T	H	D	L	P	T	L	R
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		A	D	F	V	L	I	D	K	D	G	A	V	K	R	G	S	E	I	D	Y	N	G	A	P	G	G	Y	A	A	D	P	T	E	V	V	N	Y	V	S	K	H	D	N	Q	T	L	W
Template Known Secondary structure		T	T						T	T	S					G	G	G	S			T	T			S			B	S	S	G	G	G					S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions