Job Description P15977 Confidence 100.00% Date Thu Jan 5 11:34:58 GMT 2012 Rank 1 Aligned Residues 495 % Identity 23% Template d1x1na1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.80

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		Y	E	P	Q	A	L	L	N	K	Q	K	L	W	G	A	C	V	Q	L	Y	T	L	R	S	E	K	N	W	G	I	G	D	F	G	D	L	.	K	A	M	L	V	D	V	A	K	R	G	G	S	F	I	G	L	N	P	I	H	A	L	Y	P	A	N	P	E	S	A	S	P	Y	S	P	S	S	R	R	W	L	N
Query Conservation																																						.
Alig confidence																										.	.											.
Template Conservation																										.	.
Template Sequence		W	L	P	K	R	D	P	N	D	R	R	R	A	G	I	L	L	H	P	T	S	F	P	G	.	.	P	Y	G	I	G	D	L	G	P	Q	A	F	K	F	L	D	W	L	H	L	A	G	C	S	L	W	Q	V	L	P	L	V	P	P	G	K	R	G	N	E	D	G	S	P	Y	S	G	Q	D	A	N	C	G	N
Template Known Secondary structure								G	G	G										G	G	G	S			.	.	T	T	S	S			S	S														T										S		B			S	S	S		T	T		T	T	S	B	S		S	S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	I	Y	I	D	V	N	A	V	E	D	F	H	L	S	E	E	A	Q	A	W	W	Q	L	P	T	T	Q	Q	T	L	Q	Q	A	R	D	A	D	W	V	D	Y	S	T	V	T	A	L	K	M	T	A	L	R	M	A	W	K	G	F	A	Q	R	D	D	E	Q	M	A	A	F	R	Q	F	V	A	E	Q	G	.
Query Conservation																																																																																	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	L	I	S	L	E	E	L	V	D	D	G	L	L	K	M	.	.	.	.	.	.	.	.	.	.	.	E	E	L	P	E	P	L	P	T	D	R	V	N	Y	S	T	I	S	E	I	K	D	P	L	I	T	K	A	A	K	R	L	L	S	S	E	G	E	L	K	D	Q	L	E	N	F	R	R	D	P	N	I
Template Known Secondary structure		G	G	G	S									T	S	S		G	.	.	.	.	.	.	.	.	.	.	.	G	G	S							S	B			T	T	T																					S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110												.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	S	L	F	W	Q	A	A	F	D	A	L	H	A	Q	Q	V	K	E	D	E	M	R	W	G	W	P	A	W	P	E	M	Y	Q	N	V	D	S	P	E	V	R	Q	F	C	E	E	H	R	D	D	V	D	F	Y	L	W	L	Q	W	L	A	Y	S	Q	F	A	A	C	W	E	I	S	Q	G	Y	E	M	P
Query Conservation		.
Alig confidence		.																					.	.	.	.	.																																																					.	.
Template Conservation																							.	.	.	.	.																																																					.	.
Template Sequence		S	S	W	L	E	D	A	A	Y	F	A	A	I	D	N	S	V	N	T	I	S	.	.	.	.	.	W	Y	D	W	P	E	P	L	K	N	R	H	L	A	A	L	E	E	V	Y	Q	S	E	K	D	F	I	D	I	F	I	A	Q	Q	F	L	F	Q	R	Q	W	K	K	V	R	D	Y	A	R	S	K	G	.	.
Template Known Secondary structure																					S	S	.	.	.	.	.	G	G	G	S						T	T												S																												T	T	.	.
Template Predicted Secondary structure																							.	.	.	.	.																																																					.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.							.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		I	G	L	Y	R	D	L	A	V	G	V	A	E	G	G	A	E	T	W	C	D	R	E	L	Y	C	L	K	A	S	.	.	.	.	.	.	V	G	A	P	P	D	I	L	G	P	L	G	Q	N	W	G	L	P	P	M	D	P	H	I	I	T	A	R	A	Y	E	P	F	I	E	L	L	R	A	N	M	Q	N	C
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	I	M	G	D	M	P	I	Y	V	G	Y	H	S	A	D	V	W	A	N	K	K	Q	F	L	L	N	R	K	G	F	P	L	I	V	S	G	V	P	P	D	A	F	S	E	T	G	Q	L	W	G	S	P	L	Y	D	W	K	A	M	E	K	D	G	F	S	W	W	V	R	R	I	Q	R	A	T	D	L	F
Template Known Secondary structure										S	S			S	S	S					T		G	G	G	B		B		T	T	S		B	S					B			S	S	S	S	S			B					B		B								T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		G	A	L	R	I	D	H	V	M	S	M	L	R	L	W	W	I	P	Y	G	E	T	.	A	D	Q	G	A	Y	V	H	Y	P	V	D	D	L	L	S	I	L	A	L	E	S	K	R	H	R	C	M	V	I	G	E	D	L	G	T	V	P	V	E	I	V	G	K	L	R	S	S	G	V	Y	S	Y	K	V	L	Y
Query Conservation																								.
Alig confidence																								.																	.	.
Template Conservation																																									.	.
Template Sequence		D	E	F	R	I	D	H	F	R	G	F	A	G	F	W	A	V	P	S	E	E	K	I	A	I	L	G	R	W	K	V	G	P	G	K	P	L	F	D	.	.	A	I	L	Q	A	V	G	K	I	N	I	I	A	E	D	L	G	V	I	T	E	D	V	V	Q	L	R	K	S	I	E	A	P	G	M	A	V	L	Q
Template Known Secondary structure		S						T	G	G	G	G	T							T	T		S	S	S	S	S														.	.																	S	S												T	T							G	G
Template Predicted Secondary structure																																									.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		522	.	.	.	.	.	.	.		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		F	E	N	D	H	E	K	T	.	F	R	A	P	K	A	Y	P	E	Q	S	M	A	V	A	A	T	H	D	L	P	T	L	R	G	Y	W	E	C	G	D	L	T	L	G	K	T	L	G	L	Y	P	D	E	V	V	L	R	G	L	Y	Q	D	R	E	L	A	K	Q	G	L	L	D	A	L	H	K	Y	G	C	L
Query Conservation										.
Alig confidence										.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		F	A	F	G	S	D	A	E	N	P	H	L	P	H	N	H	E	Q	N	Q	V	V	Y	T	G	T	H	D	N	D	T	I	R	G	W	W	D	T	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	E	K	S	N	V	L	K	Y	L	S	N	I	E	.	.
Template Known Secondary structure		G	S	S	S	S		T	T		T	T	S	G	G	G			S	S					S			T	T	S									T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S			.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.																								.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.			.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		P	K	R	A	G	H	K	A	S	L	M	S	M	T	P	T	L	N	R	G	L	Q	R	Y	I	A	D	S	N	S	A	L	L	G	L	Q	P	E	D	W	L	D	M	.	.	A	E	P	V	N	I	P	G	T	S	Y	Q	Y	K	N	W	R	R	K	L	S	A	T	L	E	S	M	F	A	D	D	G	V	N	K
Query Conservation																																													.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	I	S	R	G	L	I	E	G	A	V	S	S	V	A	R	I	A	I	I	P	M	Q	D	V	L	G	L	G	S	D	S	R	M	N	I	P	A	T	Q	F	G	.	.	N	W	S	W	R	I	P	S	S	T	S	F	D	N	L	D	A	E	A	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G											T	S	S		S										T	T			G	G	G		S			T	T		S	S	S	.	.		S		B				T	T			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template SS confidence
															449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.			.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		679	680	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	K	D	L	D	R	R	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	D	I	L	A	T	Y	G	R
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		514	.	.	.	.	.	520	.	.	.