Job Description P15977 Confidence 88.59% Date Thu Jan 5 11:34:58 GMT 2012 Rank 97 Aligned Residues 118 % Identity 15% Template d1g94a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.74

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.																		.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	F	A	A	C	W	E	I	S	Q	G	Y	E	M	P	I	G	L	Y	R	D	L	A	V	G	V	A	E	G	G	A	E	T	W	C	D	R	E	L	Y	C	L	K	A	S	V	G	A	P	P	D	I	L	G	P	L	G	Q	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		A	Q	F	I	D	M	V	N	R	C	S	A	A	G	.	.	V	D	I	Y	V	D	T	L	I	N	H	M	A	A	G	S	G	T	G	T	A	G	N	S	F	G	N	K	S	F	P	I	Y	S	P	Q	D	F	H	E	S	C	T	I	N	N	S	D	Y	G	N	D	R	Y	R	V	Q	N	C	E	L	V	G	L
Template Known Secondary structure														T	T	.	.										S				S	S				B	T	T	S				B	T	T	B		S	S			G	G	G	B					B			T	T												S	B	S	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		P	P	M	D	P	H	I	I	T	A	R	A	Y	E	P	F	I	E	L	L	R	A	N	M	Q	N	.	C	G	A	L	R	I	D	H	V	M	S	M	L	R	L	W	W	I	P	Y	G	E	T	A	D	Q	G	A	Y	V	H	Y	P	V	D	D	L	L	S	I	L	A	L	E	S	K	R	H	R	C	M	V	I
Query Conservation																												.
Alig confidence															.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		A	D	L	D	T	A	S	N	Y	V	Q	N	T	.	.	I	A	A	Y	I	N	D	L	Q	A	I	G	V	K	G	F	R	F	D	A	S	K	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	D	I	Q	S	.	.	L	M	A	K	V	N	G	S	P	V	V	F
Template Known Secondary structure				B		T	T	S							.	.												T								T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.				T	S		S
Template Predicted Secondary structure															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																					180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.
		495	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		199	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions