Job Description P15977 Confidence 100.00% Date Thu Jan 5 11:34:58 GMT 2012 Rank 2 Aligned Residues 482 % Identity 25% Template d1eswa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Q	K	L	W	G	A	C	V	Q	L	Y	T	L	R	S	E	K	N	W	G	I	G	D	F	G	.	D	L	K	A	M	L	V	D	V	A	K	R	G	G	S	F	I	G	L	N	P	I	H	A	L	Y	P	A	N	P	E	S	A	S	P	Y	S	P	S	S	R	R	W	L	N	V	I	Y	I	D	V	N	A	V
Query Conservation																											.
Alig confidence																	.	.									.																														.	.	.	.
Template Conservation																	.	.																																							.	.	.	.
Template Sequence		P	R	A	F	G	L	L	L	H	P	T	S	L	P	G	.	.	P	Y	G	V	G	V	L	G	R	E	A	R	D	F	L	R	F	L	K	E	A	G	G	R	Y	W	Q	V	L	P	L	G	P	T	G	Y	G	D	.	.	.	.	S	P	Y	Q	S	F	S	A	F	A	G	N	P	Y	L	I	D	L	R	P	L
Template Known Secondary structure			S								G	G	G	S			.	.	S	S	S	S			S	S													T	T										S		B		T	T		.	.	.	.		T	T	S	B	S		S	S				G	G	G			S
Template Predicted Secondary structure																	.	.																																							.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		E	D	F	H	L	S	E	E	A	Q	A	W	W	Q	L	P	T	T	Q	Q	T	L	Q	Q	A	R	D	A	D	W	V	D	Y	S	T	V	T	A	L	K	M	T	A	L	R	M	A	W	K	G	F	.	A	Q	R	D	D	E	Q	M	A	A	F	R	Q	F	V	A	E	Q	G	D	S	L	F	W	Q	A	A	F
Query Conservation																																																					.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	G	Y	V	R	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	G	F	P	Q	G	R	V	D	Y	G	L	L	Y	A	W	K	W	P	A	L	K	E	A	F	R	G	F	K	E	K	A	S	P	E	E	R	E	A	F	A	A	F	R	E	R	E	A	W	W	L	E	D	Y	A	L	F
Template Known Secondary structure				T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	B
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	H	A	Q	Q	V	K	E	D	E	M	R	W	G	W	P	A	W	P	E	M	Y	Q	N	V	D	S	P	E	V	R	Q	F	C	E	E	H	R	D	D	V	D	F	Y	L	W	L	Q	W	L	A	Y	S	Q	F	A	A	C	W	E	I	S	Q	G	Y	E	M	P	I	G	L	Y	R	D	L	A	V	G
Query Conservation
Alig confidence													.	.	.	.	.																																																					.	.
Template Conservation													.	.	.	.	.																																																					.	.
Template Sequence		M	A	L	K	G	A	H	G	G	L	P	.	.	.	.	.	W	N	R	W	P	L	P	L	R	K	R	E	E	K	A	L	R	E	A	K	S	A	L	A	E	E	V	A	F	H	A	F	T	Q	W	L	F	F	R	Q	W	G	A	L	K	A	E	A	E	A	L	G	.	.	I	R	I	I	G	D	M	P	I	F
Template Known Secondary structure								T	T	T			.	.	.	.	.	G	G	G	S						T	T												T																												T	T	.	.									S	S
Template Predicted Secondary structure													.	.	.	.	.																																																					.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		V	A	E	G	G	A	E	T	W	C	D	R	E	L	Y	C	L	K	.	.	.	.	.	.	A	S	V	G	A	P	P	D	I	L	G	P	L	G	Q	N	W	G	L	P	P	M	D	P	H	I	I	T	A	R	A	Y	E	P	F	I	E	L	L	R	A	N	M	Q	N	C	G	A	L	R	I	D	H	V	M	S
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	E	D	S	A	E	V	W	A	H	P	E	W	F	H	L	D	E	E	G	R	P	T	V	V	A	G	V	P	P	D	Y	F	S	E	T	G	Q	R	W	G	N	P	L	Y	R	W	D	V	L	E	R	E	G	F	S	F	W	I	R	R	L	E	K	A	L	E	L	F	H	L	V	R	I	D	H	F	R	G
Template Known Secondary structure				S	S	S							G	G	G	B		B		T	T	S		B	S									S	S		S	S									B								T	T	T															S						T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure													.																																																																				.
Query SS confidence													.																																																																				.
Query Sequence		M	L	R	L	W	W	I	P	Y	G	E	.	T	A	D	Q	G	A	Y	V	H	Y	P	V	D	D	L	L	S	I	L	A	L	E	S	K	R	H	R	C	M	V	I	G	E	D	L	G	T	V	P	V	E	I	V	G	K	L	R	S	S	G	V	Y	S	Y	K	V	L	Y	F	E	N	D	H	E	K	T	F	.
Query Conservation													.																																																																				.
Alig confidence													.																		.	.																																																	.
Template Conservation																															.	.
Template Sequence		F	E	A	Y	W	E	I	P	A	S	C	P	T	A	V	E	G	R	W	V	K	A	P	G	E	K	L	F	Q	.	.	K	I	Q	E	V	F	G	E	V	P	V	L	A	E	D	L	G	V	I	T	P	E	V	E	A	L	R	D	R	F	G	L	P	G	M	K	V	L	Q	F	A	F	D	D	G	M	E	N	P
Template Known Secondary structure		G	T							T	T		S	S	S	T	T														.	.							S	S								T	T													T	T							G	G	G	S	S	S	S		T	T		T
Template Predicted Secondary structure																															.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		531	.	.	.	.	.	.	.	.			540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		R	A	P	K	A	Y	P	E	Q	.	.	S	M	A	V	A	A	T	H	D	L	P	T	L	R	G	Y	W	E	C	G	D	L	T	L	G	K	T	L	G	L	Y	P	D	E	V	V	L	R	G	L	Y	Q	D	R	E	L	A	K	Q	G	L	L	D	A	L	H	K	Y	G	C	L	P	K	R	A	G	H	K	A
Query Conservation											.	.
Alig confidence											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		F	L	P	H	N	Y	P	A	H	G	R	V	V	V	Y	T	G	T	H	D	N	D	T	T	L	G	W	Y	R	T	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	E	K	A	F	M	A	R	Y	L	A	D	W	G	I	T	F	.	.	.	.	.	.	.
Template Known Secondary structure		T	S	G	G	G	S		T	T							S			T	T	S										S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.																								.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.			.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		S	L	M	S	M	T	P	T	L	N	R	G	L	Q	R	Y	I	A	D	S	N	S	A	L	L	G	L	Q	P	E	D	W	L	D	M	.	.	A	E	P	V	N	I	P	G	T	S	Y	Q	Y	K	N	W	R	R	K	L	S	A	T	L	E	S	M	F	A	D	D	G	V	N	K	L	L	K	D	L	D	R	R
Query Conservation																																					.	.
Alig confidence		.	.	.																																	.	.													.	.								.	.	.
Template Conservation		.	.	.																																															.	.								.	.	.
Template Sequence		.	.	.	R	E	E	E	E	V	P	W	A	L	M	H	L	G	M	K	S	V	A	R	L	A	V	Y	P	V	Q	D	V	L	A	L	G	S	E	A	R	M	N	Y	P	G	R	P	S	G	.	.	N	W	A	W	R	L	L	.	.	.	P	G	E	L	S	P	E	H	G	A	R	L	R	A	M	A	E	A	T
Template Known Secondary structure		.	.	.	S	S	G	G	G												S	S		S										T	T			G	G	G		S			T	T		S	S	S	.	.	T	T		B				.	.	.	T	T		S															T
Template Predicted Secondary structure		.	.	.																																															.	.								.	.	.
Template SS confidence
					426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.	.	.	.	.				.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		687	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		498	.