Job Description P15977 Confidence 95.17% Date Thu Jan 5 11:34:58 GMT 2012 Rank 65 Aligned Residues 148 % Identity 14% Template d1cxla4 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.81

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		S	Q	F	A	A	C	W	E	I	S	Q	G	Y	E	M	P	I	G	L	Y	R	D	L	A	V	.	.	.	.	G	V	A	E	G	G	A	E	T	W	C	D	R	E	L	Y	C	L	K	A	S	V	G	A	P	P	D	I	L	G	P	L	G	Q	N	W	G	L	P	P	M	D	P	H	I	I	T	A	R	A	Y
Query Conservation																											.	.	.	.
Alig confidence																			.	.							.	.	.	.
Template Conservation																			.	.
Template Sequence		A	D	F	Q	N	L	I	A	A	A	H	A	K	N	I	K	V	.	.	I	I	D	F	A	P	N	H	T	S	P	A	S	S	D	Q	P	S	F	A	E	N	G	R	L	Y	D	N	G	T	L	L	G	G	Y	T	N	D	T	Q	N	L	F	H	H	N	G	G	T	D	F	S	T	T	E	N	G	I	Y	K	N
Template Known Secondary structure														T	T				.	.						T	T							T	T		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B			S	S	S							S	B
Template Predicted Secondary structure																			.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
																	429	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	F	I	E	L	L	R	A	N	M	Q	N	.	C	G	A	L	R	I	D	H	V	M	S	M	L	R	L	W	W	I	P	Y	G	E	T	A	D	Q	G	A	Y	V	H	Y	P	V	D	D	L	L	S	I	L	A	L	E	S	K	R	H	R	C	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	D	L	A	D	L	N	H	N	N	S	T	V	D	V	Y	L	K	D	A	I	K	M	W	L	D	L	G	I	D	G	I	R	M	D	A	V	K	H	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	G	W	Q	K	S	F	M	A	A	V	N	N	Y	K	P	V	F
Template Known Secondary structure		S	T	T				B		T	T	S																	T	T							T	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	E	D	L	G	T	V	P	V	E	I	V	G	K	L	R	S	S	G	V	Y	S	Y	K	V	L	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	G	Q	W	F	L	G	V	N	E	V	S	P	E	N	H	K	F	A	N	E	S	G	M	S	L	L	D	F
Template Known Secondary structure										T	T													S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions