Return to main results Retrieve Phyre Job Id

Job DescriptionP15977
Confidence30.04%DateThu Jan 5 11:34:58 GMT 2012
Rank143Aligned Residues40
% Identity18%Templatec3b7hA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:prophage lp1 protein 11; PDBTitle: crystal structure of the prophage lp1 protein 11
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20. ........30.........40....
Predicted Secondary structure 





..








Query SS confidence 
















. .






















Query Sequence  RLDNAALAAGISPNYIN. . AHGKPQSISAETKRRLLDAMHQR
Query Conservation   
  

   

     
..  
    
        
 


  
Alig confidence 
















..






















Template Conservation 
   

   


  

     
         
  

  
 
 
Template Sequence  TINRVATLAGLNQSTVNAMFEGRSKRPTITTIRKVCGTLGIS
Template Known Secondary structure 
T


TT




T

Template Predicted Secondary structure 











Template SS confidence 









































   22.......30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions