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Job DescriptionP15977
Confidence97.37%DateThu Jan 5 11:34:58 GMT 2012
Rank35Aligned Residues272
% Identity22%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  VQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEE
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Template Sequence  IYPKSFMDTNGDGIGDLKGITSKLDYLQKLGVMAIWLSPVYDS. . . . PMDDNGYDIANYEAIADIFGNMAD. . . . . . . . .
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GGGT

SSSSSS

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TTTTSS
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GGG

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   14.....20.........30.........40.........50...... ...60.........70.........80
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  AQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  EDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETW
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MDNLLTQAKMRG. . IKIIMDLVVN. HTSDEHAW
Template Known Secondary structure  ...............................................TTT..


S.B

TTS
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   81........90.. .......100.. .......110
 
   388 .390.........400.........410... ......420.........430....... ..440..
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Query Sequence  C. . . . . . . DRELYCLKASVGAPPDILGPLGQNW. . . . . . . . . . . . . . . . . GLPPMDPHIITARAYEPFIELLRA. NMQNC
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Template Sequence  FIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQK. . IYDMMNFWIDKGI
Template Known Secondary structure 
TTSGGGGGB
SS

S
B
TTSSBSTTTT
SS
TTS
BB
TT
..TTT
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   111........120.........130.........140.........150.........160.........170..... ....180........
 
   443......450.........460.........470.........480.........490.........500.........510.........520..
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Query Sequence  GALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYF
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Template Sequence  GGFRMDVID. . . . . . MIGKIPAQHIVSNGPKLHAYLKEMNAASFGQHDLLTVGQTWGATPEIAKQYSNPVNHELSMVFQF
Template Known Secondary structure 
TTGG......GTT
BGGGTB
SS
TTTGGGS


TT


GGG
S
S

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   189190....... ..200.........210.........220.........230.........240.........250.........260..
 
   523......530........ .540.........550.........560.........570
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Query Sequence  ENDHEKTFRAPKAYPE. . . . . . . . . . . . . . . . . . . . . . . . . QSMAVAATHDLPTLRGYWECGDLTLGKTLGLY
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Template Sequence  EHIGLQHKPEAPKWDYVKELNVPALKTIFNKWQTELELGQGWNSLFWNNHDLPRVLSIWGNTGKYREKSAKAL
Template Known Secondary structure  TTGGGGB
TTS
TTSB

S

S
TTT



S

TTS

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SSTT
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   263......270.........280.........290.........300.........310.........320.........330.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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