Job Description P15977 Confidence 94.92% Date Thu Jan 5 11:34:58 GMT 2012 Rank 68 Aligned Residues 252 % Identity 13% Template c2e8yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amyx protein; PDBTitle: crystal structure of pullulanase type i from bacillus subtilis str.2 168 Resolution 2.11 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.								.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		S	Q	F	A	A	C	W	E	I	S	Q	G	Y	E	M	P	I	G	L	Y	R	D	L	A	V	G	V	A	E	G	G	A	E	T	W	C	D	R	E	L	Y	C	L	K	A	S	V	G	A	P	P	D	I	L	G	P	L	G	Q	N	.	.	.	.	.	.	.	W	G	L	P	P	M	D	P	H	I	I	T	A
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																.	.																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	L	K	Q	M	I	N	T	L	H	Q	H	G	.	.	L	R	V	I	L	D	V	V	F	N	H	V	Y	K	R	E	N	S	P	F	E	K	T	.	.	.	.	.	.	.	.	.	.	V	P	G	Y	F	F	R	H	D	E	C	G	K	P	S	N	G	T	G	V	G	N	D	I	A	S	E	R	R	M	A
Template Known Secondary structure														T	T	.	.									T	T			S	S	G	G	G	S						.	.	.	.	.	.	.	.	.	.	S	T	T	T	S	B		B		T	T	S	S	B			T	T	S	S	S			B		T	T	S
Template Predicted Secondary structure																.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.											.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																											.															.	.	.	.	.	.
Query SS confidence																	.	.																																											.															.	.	.	.	.	.
Query Sequence		R	A	Y	E	P	F	I	E	L	L	R	A	N	M	Q	.	.	N	C	G	A	L	R	I	D	H	V	M	S	M	L	R	L	W	W	I	P	Y	G	E	T	A	D	Q	G	A	Y	V	H	Y	P	V	D	D	L	L	S	I	L	.	A	L	E	S	K	R	H	R	C	M	V	I	G	E	.	.	.	.	.	.
Query Conservation																	.	.																																											.															.	.	.	.	.	.
Alig confidence					.	.											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.															.	.	.	.	.	.
Template Conservation					.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	F	.	.	I	A	D	C	V	V	Y	W	L	E	E	Y	N	V	D	G	F	R	F	D	L	L	G	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	D	T	V	L	Y	M	K	E	K	A	T	K	A	K	P	G	I	L	L	F	G	E	G	W	D	L	A	T
Template Known Secondary structure					.	.																				T	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B															S	T	T
Template Predicted Secondary structure					.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		384	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.																					.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
																			497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.																.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	G	T	V	P	V	E	I	V	G	K	L	R	S	S	G	V	Y	S	Y	K	V	L	Y	F	E	N	D	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	F	R	A	P	K	A	Y	P	E	Q	S	M	A	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	P	H	E	Q	K	A	A	L	A	N	A	P	R	M	P	G	I	G	F	F	N	D	M	F	R	D	A	V	K	G	N	T	F	H	L	K	A	T	G	F	A	L	G	N	G	E	S	A	Q	A	V	M	H	G	I	A	G	S	S	G	W	K	A	L	A	P	I	V	P	E	P	S	Q	S	I	N	Y	V
Template Known Secondary structure		S	S		G	G	G	B			G	G	G	G	G	G		T	T																S	S	S	T	T				G	G	G	T		G	G	G									B	T	T	S		B	T	T	B			S	S	S	S	G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	H	D	L	P	T	L	R	G	Y	W	E	C	G	D	L	T	L	G	K	T	L	G	L	Y	P	D	E	V	V	L	R	G	L	Y	Q	D	R	E	L	A	K	Q	G	L	L	D	A	L	H	K	Y	G	C	L	P	K	R	A	G	H	K	A	S	L	M	S	M	T	P	T	L	N	R	G	L	Q	R	Y
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	H	D	N	H	T	F	W	D	K	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	L	P	Q	E	N	D	S	R	K	R	S	R	Q	R	L
Template Known Secondary structure				S	S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.																																																			.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	S	N	S	A	L	L	G	L	Q	P	E	D	W	L	D	M	A	E	P	V	N	I	P	G	T	S	Y	Q	Y	K	N	W	R	R	K	L	S	A	T	L	E	S	M	F	A	D	D	G	V	N	K	L	L	K	D	L	D	R	R	R	R	A
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		A	V	A	I	I	L	L	A	Q	G	V	P	F	I	.	H	S	G	Q	E	F	F	R	T	K	Q	G	V	E	N	S	Y	Q	S	S	D	S	I	N	Q	L	D	W	D	R	R	E	T	F	K	E	D	V	H	Y	I	R	R	L	I	S	L	R	K	A
Template Known Secondary structure								T	S	B	S					.		T	T	G	G	G	T				T	T		S			T	T							S									T
Template Predicted Secondary structure																.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions