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Job DescriptionP15977
Confidence98.23%DateThu Jan 5 11:34:58 GMT 2012
Rank7Aligned Residues276
% Identity18%Templatec1m53A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:isomaltulose synthase; PDBTitle: crystal structure of isomaltulose synthase (pali) from2 klebsiella sp. lx3
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  VQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEE
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Template Sequence  IYPRSFKDTNDDGIGDIRGIIEKLDYLKSLGIDAIWINPHYD. . . . SPNTDNGYDISNYRQIMKEYGTME. . . . . . . . . .
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GGGT

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   56...60.........70.........80.........90....... ..100.........110.........120.
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  AQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVK
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   308.310.........320.........330.........340.........350.........360.........370........
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Query Sequence  EDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVG. . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFDSLVAEMKKRN. . MRLMIDVVINHTSDQHPWF
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SB

TTS
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   122.......130.... .....140.........150...
 
   379380.........390.........400.........410... ......420.........430.........
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Query Sequence  . . . . . . . . . . . . . . . . . . VAEGGAETWCDRELYCLKASVGAPPDILGPLGQNW. GLPPMDPHIITARAYEPFIELLRANM
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Template Sequence  IQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLHYFARQQPDLNWDNPKVRED. . LYAMLRFWL
Template Known Secondary structure 
TT
TTGGGB


SSSS
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B
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   154.....160.........170.........180.........190.........200.........210.........220.. .......230.
 
   440. ........450.........460.... .....470.........480.........490.........500.........510..
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Query Sequence  QN. CGALRIDHVMSMLRLWWIPYGET. . . . . . ADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLRSS
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Template Sequence  DKGVSGMRFDTVATYSKIPGFPNLTPEQQKNFAEQYTMGPNIHRYIQEMNRKVLSRYDVATAGEIFGVPLDRSSQFFDRR
Template Known Secondary structure  TTT

TTGGGSS

TT




TTT

TTTGGGS


TT

GGGT
GG
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   232.......240.........250.........260.........270.........280.........290.........300.........310.
 
   513......520.........530 .........540.........550.........560.......
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Query Sequence  GVYSYKVLYFENDHEKTF. . . . . . . . . . . . . . . . . . . . . . RAPKAYPEQSMAVAATHDLPTLRGYWECGDLTLGKTL
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Template Sequence  RHELNMAFMFDLIRLDRDSNERWRHKSWSLSQFRQIISKMDVTVGKYGWNTFFLDNHDNPRAVSHFGDDRPQWREAS
Template Known Secondary structure  G
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TTTTTTB
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TTT

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   312.......320.........330.........340.........350.........360.........370.........380........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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