Job Description P35340 Confidence 97.90% Date Wed Jan 25 15:20:51 GMT 2012 Rank 328 Aligned Residues 155 % Identity 16% Template c3apoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of full-length erdj5 Resolution 2.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																													.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.											.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	P	V	E	L	I	A	T	L	D	D	S	A	K	S	A	E	I	K	E	L	L	A	E	I	A	.	E	L	S	D	K	V	T	F	K	E	.	.	.	.	.	.	.	.	.	.	D	N	S	L	P	V	R	K	P	S	F	L	I	T	N	P	G	S	N	Q	G	P	R	F	A	G	S	P	L	G	H	E
Query Conservation																													.											.	.	.	.	.	.	.	.	.	.
Alig confidence																													.											.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																				.	.
Template Sequence		K	E	P	W	L	V	D	F	F	A	P	W	S	P	P	S	R	A	L	L	P	E	L	R	K	A	S	T	L	L	Y	G	Q	L	K	V	G	T	L	D	C	T	I	H	E	G	L	C	N	M	Y	N	I	Q	A	Y	P	T	T	V	V	F	N	Q	S	S	.	.	I	H	E	Y	E	G	H	H	S	A	E	Q
Template Known Secondary structure			S									T	T																		T	T	T	T								T	T	T								T	T			S	S	S							T	T		.	.						S		S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																							.	.																					.
Query SS confidence																																							.	.																					.
Query Sequence		F	T	S	L	V	L	A	L	L	W	T	G	G	H	P	S	K	E	A	Q	S	L	L	E	Q	I	R	H	I	D	G	D	F	E	F	E	T	.	.	Y	Y	S	L	S	C	H	N	C	P	D	V	V	Q	A	L	N	L	M	S	.	V	L	N	P	R	I	K	H	T	A	I	D	G	G	T	F	Q	N	E	I
Query Conservation																																							.	.																					.
Alig confidence											.	.																											.	.																					.
Template Conservation											.	.
Template Sequence		I	L	E	F	I	E	D	L	R	.	.	N	P	S	V	V	S	L	T	P	S	T	F	N	E	L	V	K	Q	R	K	H	D	E	V	W	M	V	D	F	Y	S	P	W	S	H	P	S	Q	V	L	M	P	E	W	K	R	M	A	R	T	L	T	G	L	I	N	V	G	S	V	D	C	G	Q	Y	H	S	F	C
Template Known Secondary structure											.	.	S		S													T	T	T			T	T										T	T																			T	T	T	S							T	T	T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		546	.	.	.	550	.	.	.	.			.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	R	N	V	M	G	V	P	A	V	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	E	N	V	Q	R	Y	P	E	I	R	F
Template Known Secondary structure				T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions