328 c3apoA_ Probab=97.90   E-value=0.0016  Score=41.10  Aligned_columns=155  Identities=16%

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHH-HCCCCEEEEE----------CCCCCCCCCEEEEECCCCCCCEEEEEECCCHH
Q ss_conf             787799999769854489999999986-0285738996----------26676413526873378743079984034046
Q batch____        18 TKPVELIATLDDSAKSAEIKELLAEIA-ELSDKVTFKE----------DNSLPVRKPSFLITNPGSNQGPRFAGSPLGHE   86 (521)
Q Consensus        18 ~~~v~~~~~~~~~~~~~~~~~~l~~~~-~~s~~i~~~~----------~~~~~~~~p~~~~~~~~~~~~i~f~g~p~g~e   86 (521)
                      ..++-+..+..-|..|..+...+++++ .+.+++.+..          .+......|++.+..++.  .+.|.|-..-++
T Consensus       375 ~~~~lV~fy~~~c~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pti~~~~~~~--~~~y~G~~~~~~  452 (688)
T c3apoA_         375 KEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSS--IHEYEGHHSAEQ  452 (688)
T ss_dssp             CSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE--EEEECSCSCHHH
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEEECCCC--CCCCCCCCCHHH
T ss_conf             873489974676701344538999998740356408988353320133216824475589944886--001467659889


Q ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEE--EEECCCCCCHHHHHHHHHHH-HCCCCEEEEEEECCCCHHHH
Q ss_conf             7999999987068887889889999973178726899--98438888858999878763-00765379897524598889
Q batch____        87 FTSLVLALLWTGGHPSKEAQSLLEQIRHIDGDFEFET--YYSLSCHNCPDVVQALNLMS-VLNPRIKHTAIDGGTFQNEI  163 (521)
Q Consensus        87 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~--~~~~~c~~cp~~v~~~~~~a-~~~~~i~~~~~~~~~~~~~~  163 (521)
                      +..|+....  ......|.+...+..-.-....++-+  |.+|.|..|-........+| ..++.+.--.+|+.+++++.
T Consensus       453 i~~fi~~~~--~p~~i~l~~~~f~~~v~~~~~~~~~lv~fy~p~c~~~~~~~p~~~~~A~~~~~~~~~~~iD~~~~~~~~  530 (688)
T c3apoA_         453 ILEFIEDLR--NPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFC  530 (688)
T ss_dssp             HHHHHHHHH--SCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHH
T ss_pred             HHHHHHHHC--CCCCEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHH
T ss_conf             731133201--356112074665555203555624898515776540355407889988851276159996030116778


Q ss_pred             HHCCCCCCCEEEE
Q ss_conf             8708874755887
Q batch____       164 TDRNVMGVPAVFV  176 (521)
Q Consensus       164 ~~~~~~~vp~~~~  176 (521)
                      ++++|.+.|.+.+
T Consensus       531 ~~~~I~~~Pti~~  543 (688)
T c3apoA_         531 TQENVQRYPEIRF  543 (688)
T ss_dssp             HHTTCCSSSEEEE
T ss_pred             HHCCCCCCCEEEE
T ss_conf             7559875875899