 |
Job Description | P77599 | Confidence | 28.17% | Date | Thu Jan 5 12:30:55 GMT 2012 |
Rank | 48 | Aligned Residues | 70 |
% Identity | 13% | Template | d4ubpb_ |
SCOP info | beta-clip
| Urease, beta-subunit
| Urease, beta-subunit
|
Resolution | 1.55 |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | V | T | P | D | R | T | R | L | I | F | N | E | S | D | K | S | I | S | V | T | L | R | N | N | D | P | K | L | P | Y | L | A | Q | S | W | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | D | E | K | G | N | K | I | T | S | P | L | T | V | L | P | P | V | Q | R | I | D | S | M | M | N | G | Q | V |
Query Conservation |   |
|   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |
|   |
|   |
|
|
|
|
| . |
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
Template Sequence |   |
G | E | Y | R | V | A | E | G | E | I | E | I | N | A | G | R | E | K | T | T | I | R | V | S | N | T | G | D | R | . |
P | I | Q | V | G | S | H | I | H | F | V | E | V | N | K | E | L | L | F | D | R | A | E | G | I | G | R | R | L | N | I | P | . |
. |
. |
S | G | T | A | A | R | F | E | P | G | E | E | M | E | V |
Template Known Secondary structure |   |
T |
|
|
|
|
| S | S |
|
|
| T | T | T | T | S |
|  |  |  |  |  |  |  |  |
| S | S | S | . |
|  |  |  |  | T | T | S |
| G | G | G | S |
| T | T |  |  | S |
| G | G | G | G | T | T |  |  |  |
| S |
| . | . | . | T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
95 | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
K | V | Q | G | M | P | D |
Query Conservation |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|
Template Sequence |   |
E | L | T | E | L | G | G |
Template Known Secondary structure |   |
 |  |  |  |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|