Return to main results Retrieve Phyre Job Id

Job DescriptionP77599
Confidence99.74%DateThu Jan 5 12:30:55 GMT 2012
Rank14Aligned Residues78
% Identity17%Templated1p5va2
SCOP infoC2 domain-like Periplasmic chaperone C-domain Periplasmic chaperone C-domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  EKVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVPLNVKMDSVPVLTYVNDFGA
Query Conservation             

     
  
 
 








  
 
             

 
 
           
    




 
Alig confidence 








..































.....
















...











Template Conservation 

 
  
  ..

     
  
 
 







   
      .....    

 
 
       ... 
    




 
Template Sequence  KGTPIQFAE. . NLSWKVDGGKLIAENPSPFYMNIGELTFGGKS. . . . . IPSHYIPPKSTWAFDLP. . . NVSWRIINDQGG
Template Known Secondary structure 


GGGGGG..G
TT
SSS
TT.....




TT

...
B
TTS
Template Predicted Secondary structure 


..







.....








...



Template SS confidence 















































































   148.150...... ...160.........170.........180........ .190.........200..... ....210.......
 
   228.230 .....
Predicted Secondary structure 
.
Query SS confidence 


.




Query Sequence  RMP. LFFQC
Query Conservation     .     
Alig confidence 


.




Template Conservation          
Template Sequence  LDRLYSKNV
Template Known Secondary structure  B




Template Predicted Secondary structure 



Template SS confidence 








   225....230...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions