Job Description P77599 Confidence 32.43% Date Thu Jan 5 12:30:55 GMT 2012 Rank 45 Aligned Residues 44 % Identity 27% Template c3ts3D_ PDB info PDB header:viral protein Chain: D: PDB Molecule:capsid polyprotein; PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution Resolution 1.49 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure															.	.	.						.
Query SS confidence															.	.	.						.
Query Sequence		F	N	V	R	E	I	P	P	K	S	N	K	P	.	.	.	N	T	L	Q	I	.	A	L	Q	T	R	I	K	L	F	W	R	P	K	A	L	E	K	V	S	M	K	S	P	W	Q	H	K	V	T	L	T	R	S	G
Query Conservation															.	.	.						.
Alig confidence															.	.	.						.											.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		F	C	L	A	A	I	P	A	A	T	T	S	S	R	Y	N	N	Q	I	T	I	P	S	I	G	Y	R	G	T	L	F	L	.	.	.	.	.	.	.	.	L	D	A	A	S	W	W	N	I	L	D	V	T	Q	T	G
Template Known Secondary structure									B			T	T	S							S	S												.	.	.	.	.	.	.	.													T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.									.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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