Job Description P77599 Confidence 31.24% Date Thu Jan 5 12:30:55 GMT 2012 Rank 46 Aligned Residues 83 % Identity 6% Template c3ginB_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:sodium/calcium exchanger 1; PDBTitle: crystal structure of e454k-cbd1 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		V	T	P	D	R	T	R	L	I	F	N	E	S	D	K	S	I	S	V	T	L	R	N	N	.	D	P	K	L	P	Y	L	A	Q	S	W	I	E	D	E	K	G	N	K	I	T	S	P	L	T	V	L	P	P	V	Q	R	I	D	S	M	M	N	G	Q	V	K	V	Q	G	M	P	D	I	N	K	L	P	A	D
Query Conservation																										.
Alig confidence																										.																																																	.
Template Conservation																																																																											.
Template Sequence		I	F	F	E	Q	G	T	Y	Q	C	L	E	N	C	G	T	V	A	L	T	I	I	R	R	G	G	D	L	T	N	T	V	F	V	D	F	R	T	E	D	G	T	A	N	A	G	S	D	Y	E	F	T	E	G	T	V	V	F	K	P	G	E	T	Q	K	E	I	R	V	G	I	I	D	.	D	D	I	F	E	E
Template Known Secondary structure					S		S						T	T	S	S										S	S		T	T	S											S	S	S		B	T	T	T	B											T	T										B			.		S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.
		109	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	S	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	N	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		453	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions