Job Description P77599 Confidence 5.63% Date Thu Jan 5 12:30:55 GMT 2012 Rank 87 Aligned Residues 102 % Identity 21% Template c2l3bA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of the bt_0084 lipoprotein from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr376 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	R	I	K	L	F	W	R	P	K	A	L	E	K	V	S	M	K	S	P	W	Q	H	K	V	T	L	T	R	S	G	Q	A	F	T	V	N	N	P	T	P	Y	Y	V	I	I	S	N	A	S	A	Q	K	N	G	N	P	A	A	G	F	S	P	L	V	I	E	P	K	T	T	V	P	L	N	V	K	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence														.	.	.																		.	.	.	.											.	.									.																					.	.	.
Template Conservation														.	.	.																		.	.	.	.											.	.									.
Template Sequence		F	S	I	E	T	M	P	V	P	K	K	L	.	.	.	K	V	G	E	T	A	E	I	R	C	Q	L	H	R	D	G	R	.	.	.	.	F	E	E	T	K	Y	F	I	R	Y	.	.	F	Q	P	D	G	A	G	T	.	L	K	M	S	D	G	T	V	L	L	P	N	D	L	Y	P	L	P	G	E	T	F	R
Template Known Secondary structure											S	S		.	.	.		T	T												S	S		.	.	.	.		S	S								.	.			S	S					.				T	T	S					T	T	S					S		S
Template Predicted Secondary structure														.	.	.																		.	.	.	.											.	.									.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
										213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	M	D	S	V	P	V	L	T	Y	V	N	D	F	G	A	R	M	P	L	F	F	Q	C	N	G	N	S	C	Q	V	D	E	E	Q	S
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	Y	T	S	A	S	T	D	Q	Q	T	V	D	V	Y	F	Q	D	S	F	G	Q	L	Q	Q	L	T	F	S	F	N	N	D	S	S	K	E	E	E	L	E	H
Template Known Secondary structure									S	S											T	T	S										S				S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions