Job Description P77599 Confidence 100.00% Date Thu Jan 5 12:30:55 GMT 2012 Rank 3 Aligned Residues 195 % Identity 22% Template c2co7B_ PDB info PDB header:fibril protein Chain: B: PDB Molecule:putative fimbriae assembly chaperone; PDBTitle: salmonella enterica safa pilin in complex with the safb2 chaperone (type ii) Resolution 1.8 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	A	S	V	T	P	D	R	T	R	L	I	F	N	E	S	D	K	S	I	S	V	T	L	R	N	N	D	P	K	L	P	Y	L	A	Q	S	W	I	E	D	E	K	G	N	K	I	T	S	P	L	T	V	L	P	P	V	Q	R	I	D	S	M	M	N	G	Q	V	K	V	Q	G	M	P	D	I	N	K
Query Conservation
Alig confidence																																		.																.																											.	.
Template Conservation																																		.																.																											.	.
Template Sequence		T	K	L	F	S	V	K	L	G	A	T	R	V	I	Y	H	A	G	T	A	G	A	T	L	S	V	S	N	P	Q	N	Y	.	P	I	L	V	Q	S	S	V	K	A	A	D	K	S	S	.	P	A	P	F	L	V	M	P	P	L	F	R	L	E	A	N	Q	Q	S	Q	L	R	I	V	R	T	.	.	G	G	D
Template Known Secondary structure										S		S						T	T	S	S										S	S	S	.											T	T	S	S	S	.	B		S					S	S						T	T											.	.
Template Predicted Secondary structure																																		.																.																											.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	D	R	E	S	M	F	Y	F	N	V	R	E	I	P	P	K	S	N	K	P	N	T	L	Q	I	A	L	Q	T	R	I	K	L	F	W	R	P	K	A	L	E	K	V	S	M	K	S	P	W	Q	H	K	V	T	L	T	R	S	G	Q	A	F	T	V	N	N	P	T	P	Y	Y	V	I	I	S	N	A
Query Conservation
Alig confidence																								.	.	.																												.	.
Template Conservation																								.	.	.																												.	.
Template Sequence		M	P	T	D	R	E	T	L	Q	W	V	C	I	K	A	V	P	P	E	T	L	D	.	.	.	L	N	L	S	I	N	A	C	D	K	L	I	F	R	P	D	A	V	K	G	T	P	E	D	V	A	G	.	.	N	L	R	W	V	E	T	G	N	K	L	K	V	E	N	P	T	P	F	Y	M	N	L	A	S	V
Template Known Secondary structure				S	S	S																		.	.	.																T	T	S		S						G	G	.	.	G							T	T								S	S	S		B
Template Predicted Secondary structure																								.	.	.																												.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		S	A	Q	K	N	G	N	P	A	A	G	F	S	P	L	V	I	E	P	K	T	T	V	P	L	N	V	K	M	D	S	V	P	V	L	T	Y	V	N	D	F	G	A	R	M	P	.	L	F	F	Q	C
Query Conservation																																																.
Alig confidence										.	.	.	.															.	.	.																		.
Template Conservation										.	.	.	.															.	.	.
Template Sequence		T	V	G	G	K	P	I	T	.	.	.	.	G	L	E	Y	V	P	P	F	A	D	K	T	L	N	.	.	.	H	G	D	I	E	W	R	V	I	T	D	F	G	G	E	S	H	P	F	H	Y	V	L
Template Known Secondary structure				T	T					.	.	.	.					B		T	T							.	.	.									B		T	T	S	S	B
Template Predicted Secondary structure										.	.	.	.															.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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