Job Description P77599 Confidence 100.00% Date Thu Jan 5 12:30:55 GMT 2012 Rank 4 Aligned Residues 193 % Identity 26% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	A	S	V	T	P	D	R	T	R	L	I	F	N	E	S	D	K	S	I	S	V	T	L	R	N	N	D	P	K	L	P	Y	L	A	Q	S	W	I	E	D	E	K	G	N	K	I	T	S	P	L	T	V	L	P	P	V	Q	R	I	D	S	M	M	N	G	Q	V	K	V	Q	G	M	P	D	I	N	K
Query Conservation
Alig confidence																																		.																.	.	.																									.	.
Template Conservation																																		.																.	.	.																									.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	.	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	.	.	G	G	V
Template Known Secondary structure										S	S	S						T	T		S										S	S	S	.											T	T	S			.	.	.						S	S						T	T											.	.	S
Template Predicted Secondary structure																																		.																.	.	.																									.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	D	R	E	S	M	F	Y	F	N	V	R	E	I	P	P	K	S	N	K	P	N	T	L	Q	I	A	L	Q	T	R	I	K	L	F	W	R	P	K	A	L	E	K	V	S	M	K	S	P	W	Q	H	K	V	T	L	T	R	S	G	Q	A	F	T	V	N	N	P	T	P	Y	Y	V	I	I	S	N	A
Query Conservation
Alig confidence																					.	.																																.	.
Template Conservation																					.	.																																.	.
Template Sequence		F	P	R	D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	.	.	V	G	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	.	.	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P	S	P	F	Y	M	N	I	G	E	L
Template Known Secondary structure				S	S	S															.	.																				T	T	S		S		G	G	G	T	G	G	.	.	G							T	T								S	S	S
Template Predicted Secondary structure																					.	.																																.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	K	N	G	N	P	A	A	G	F	S	P	L	V	I	E	P	K	T	T	V	P	L	N	V	K	M	D	S	V	P	V	L	T	Y	V	N	D	F	G	A	R	M	P	L	F	F	Q
Query Conservation
Alig confidence								.	.	.	.	.																		.	.
Template Conservation								.	.	.	.	.																		.	.
Template Sequence		T	F	G	G	K	S	.	.	.	.	.	I	P	S	H	Y	I	P	P	K	S	T	W	A	F	D	L	A	.	.	R	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L	Y	S	K
Template Known Secondary structure				T	T			.	.	.	.	.								T	T									.	.								B		T	T	S		B
Template Predicted Secondary structure								.	.	.	.	.																		.	.
Template SS confidence
		183	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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