Job Description P77599 Confidence 16.90% Date Thu Jan 5 12:30:55 GMT 2012 Rank 59 Aligned Residues 72 % Identity 17% Template c1e9zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:urease subunit alpha; PDBTitle: crystal structure of helicobacter pylori urease Resolution 3.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.												.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	V	T	P	D	R	T	R	L	I	F	N	E	S	D	K	S	I	S	V	T	L	R	N	N	D	P	K	L	P	Y	L	A	Q	S	W	I	E	D	E	K	G	N	K	I	T	S	P	L	.	.	.	.	.	.	.	.	.	.	.	T	V	L	P	P	V	Q	R	I	D	S	M	M	N	G	Q	V	K	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																.
Template Sequence		G	E	L	F	L	K	N	E	D	I	T	I	N	E	G	K	K	A	V	S	V	K	V	K	N	V	G	D	R	.	P	V	Q	I	G	S	H	F	H	F	F	E	V	N	R	.	C	L	D	F	D	R	E	K	T	F	G	K	R	L	D	I	A	A	G	T	A	V	R	F	E	P	G	E	E	K	S	V	E	L
Template Known Secondary structure		T						S	S				T	T	S	S												S	S	S	.						T	T	S		G	G	G	S		T	.	T			S						T	T					S	S	T	T							T	T
Template Predicted Secondary structure																															.																.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		97	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	M	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	I	G	G
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions