 |
Job Description | P32664 | Confidence | 99.72% | Date | Thu Jan 5 11:49:56 GMT 2012 |
Rank | 59 | Aligned Residues | 126 |
% Identity | 15% | Template | d2a6ta2 |
SCOP info | Nudix
| Nudix
| mRNA decapping enzyme-like
|
Resolution | 2.50 |
|
 |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | |
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | C | I | I | V | A | I | R | R | D | D | . |
. |
S | I | L | L | A | Q | H | T | R | H | R | N | G | V | H | T | V | L | A | G | F | V | E | V | G | E | T | L | E | Q | A | V | A | R | E | V | M | E | E | S | G | I | K | V | K | N | L | R | Y | V | T | S | Q | P | W | P | F | P | Q | S | L | M | T | A | F | M | A |
Query Conservation |   |
|   |
|
|
|
|
|   |   |   |   | . | . |   |
|
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   | . |   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
Template Sequence |   |
P | V | R | G | A | I | M | L | D | M | S | M | Q | Q | C | V | L | V | K | G | W | K | A | . |
S | S | G | W | G | F | P | K | G | K | I | D | K | D | E | S | D | V | D | C | A | I | R | E | V | Y | E | E | T | G | F | D | C | S | S | R | I | N | P | N | E | F | I | D | M | T | I | R | G | Q | N | . |
. |
V | R | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  | B |
| S | S | S | S |  |  |  |  |  |  |  | S | S | T | . | T |
|
|
| B |
| S |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T | T |
|
| T | T |
|  |  |  |  |  |  | T | T |  |  | . | . |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
. | . | . |
  |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Y | D | S | G | D | I | V | I | D | P | K | E | L | L | E | A | N | W | Y | R | Y | D | D | L | P | L | L | P | P | P | G | T | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | R | R | L | I | E | D | T | V | A | M | C | R | A | E | Y | E |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|
|
|   |
|
|   |   |   |
|
| . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | I | I | P | G | I | S | L | D | T | R | F | E | I | S | K | I | E | W | H | N | L | M | D | L | P | T | F | K | M | K | N | K | F | Y | M | V | I | P | F | L | A | P | L | K | K | W | I | K | K | R | N | I | A | N | N | T | T | K | E |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| T | T |
|
|
|
|  |  |  |  |  |  |  |  | G | G | G | S | T | T |
|
|
|
| G | G | G | T | T | T | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|