Job Description P32664 Confidence 28.21% Date Thu Jan 5 11:49:56 GMT 2012 Rank 274 Aligned Residues 51 % Identity 14% Template c3lpeF_ PDB info PDB header:transferase Chain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii Resolution 1.90 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		C	G	Y	C	G	H	E	M	Y	P	S	K	T	E	W	A	M	L	C	S	H	C	R	E	R	Y	Y	P	Q	I	A	P	C	I	I	V	A	I	R	R	D	D	S	I	L	L	A	Q	H	T	R	H	R	.	N	G	V	H	T	V
Query Conservation																																																							.
Alig confidence										.	.	.	.	.	.													.	.																										.
Template Conservation										.	.	.	.	.	.													.	.
Template Sequence		C	L	K	C	K	Y	L	T	.	.	.	.	.	.	N	D	E	I	C	P	I	C	H	S	P	T	.	.	S	E	N	W	I	G	L	L	I	V	I	N	P	E	K	S	E	I	A	K	K	A	G	I	D	I	K	G	K	Y	A	L
Template Known Secondary structure			T	T	T		B			.	.	.	.	.	.	S	S	S	B		T	T	T			B		.	.		S									S		T	T	T							T	T			S						S
Template Predicted Secondary structure										.	.	.	.	.	.													.	.
Template SS confidence
		4	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions