Job Description P32664 Confidence 99.85% Date Thu Jan 5 11:49:56 GMT 2012 Rank 16 Aligned Residues 125 % Identity 18% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.
Predicted Secondary structure												.													.														.	.																																	.	.	.	.
Query SS confidence												.													.														.	.																																	.	.	.	.
Query Sequence		C	I	I	V	A	I	R	R	D	D	.	S	I	L	L	A	Q	H	T	R	H	R	N	.	G	V	H	T	V	L	A	G	F	V	E	V	G	.	.	E	T	L	E	Q	A	V	A	R	E	V	M	E	E	S	G	I	K	V	K	N	L	R	Y	V	T	S	Q	P	W	P	F	.	.	.	.	P	Q	S	L	M
Query Conservation												.													.														.	.																																	.	.	.	.
Alig confidence												.													.														.	.																																	.	.	.	.
Template Conservation
Template Sequence		A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	R	D	A	R	G	W	S	V	T
Template Known Secondary structure									S	S	S										S	S	S	S	T	T					S						T	T	T			S														S	S			S											S	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	F	M	A	E	Y	D	S	G	D	I	V	I	D	P	K	E	L	L	E	A	N	W	Y	R	Y	D	D	L	P	L	L	P	P	P	G	T	V	A	R	R	L	I	E	D	T	V	A	M	C	R	A	E
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	F	D	H	.	L	Q	L	I	E	Q	A	R	E	R	L	T	Q	K
Template Known Secondary structure										S									S		S	S										T	T	S		B	S	T	T		.
Template Predicted Secondary structure																																									.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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