Job Description P32664 Confidence 99.19% Date Thu Jan 5 11:49:56 GMT 2012 Rank 80 Aligned Residues 102 % Identity 16% Template c2j8qB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion. Resolution 2.3 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190									.	.	.
Predicted Secondary structure																	.	.																																											.	.									.	.	.	.	.	.	.	.
Query SS confidence																	.	.																																											.	.									.	.	.	.	.	.	.	.
Query Sequence		Q	I	A	P	C	I	I	V	A	I	R	R	D	D	S	.	.	I	L	L	A	Q	H	T	R	H	R	N	G	V	H	T	V	L	A	G	F	V	E	V	G	E	T	L	E	Q	A	V	A	R	E	V	M	E	E	S	G	I	K	.	.	V	K	N	L	R	Y	V	T	.	.	.	.	.	.	.	.	S	Q	P
Query Conservation																	.	.																																											.	.									.	.	.	.	.	.	.	.
Alig confidence																	.	.							.	.	.																																		.	.									.	.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		R	R	T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	.	.	.	G	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	R	Q	D	D	W	V	I	D	D	C	I	G	N	W	W	R	P	N	F	E	P	P	Q
Template Known Secondary structure													S	S	S										.	.	.	S	T	T					S						T	T																																		S	S	S	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		194	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure					.	.	.	.	.	.	.																	.	.
Query SS confidence					.	.	.	.	.	.	.																	.	.
Query Sequence		W	P	F	.	.	.	.	.	.	.	P	Q	S	L	M	T	A	F	M	A	E	Y	D	S	G	D	.	.	I	V	I	D	P	K	E	L	L	E	A	N	W	Y	R	Y	D	D
Query Conservation					.	.	.	.	.	.	.																	.	.
Alig confidence					.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		Y	P	Y	I	P	A	H	I	T	K	P	K	E	H	K	K	L	F	L	V	Q	L	Q	E	K	A	L	F	A	V	P	K	N	Y	K	L	V	A	A	P	L	F	E	L	Y	D
Template Known Secondary structure		B	S	S			T	T		S			S												S	S							T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions