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Job DescriptionP32664
Confidence99.50%DateThu Jan 5 11:49:56 GMT 2012
Rank76Aligned Residues124
% Identity17%Templatec2i6kA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1; PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130........ .140.........150 ...... ...160...... ...170.........180..... ....190
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Query Sequence  CIIVAIRRD. DSILLAQHTRHR. . . NGVHTV. LAGFVEVGET. . . . . . . . . LEQAVAREVMEESGIKVKN. . . . . LRYVT
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Template Sequence  AFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLT
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   53......60.........70.........80.........90.........100.........110.........120.........130..
 
   191...... ..200.........210.........220.........230.... .....240.........250.
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Query Sequence  SQPWPFP. . . . . . . QSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLL. . . . . . . . . . . . PPPGTVARRLIEDTVAM
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Template Sequence  RIHYKAQSDGIWGEHEIDYILLVR. XNVTLNPDPNEIKSYCYVSKEELKELLKKAASGEIKITPWFKIIAATFLFKWWDN
Template Known Secondary structure  SSSSB.







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   133......140.........150...... ...160.........170.........180.........190.........200.........210.
 
   252..
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Query Sequence  CRA
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Template Sequence  LNH
Template Known Secondary structure  SS
Template Predicted Secondary structure 
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   212..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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