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Job Description | P32664 | Confidence | 28.57% | Date | Thu Jan 5 11:49:56 GMT 2012 |
Rank | 271 | Aligned Residues | 29 |
% Identity | 17% | Template | c1z2qA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:lm5-1; |
PDBTitle: high-resolution solution structure of the lm5-1 fyve domain2 from leishmania major
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Resolution | UNK |
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93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | S | H | K | Y | C | G | Y | C | G | H | E | M | Y | P | S | K | T | E | W | A | M | L | C | S | H | C | R | E | R | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | D | A | P | A | C | N | G | C | G | C | V | F | T | T | T | V | . |
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R | R | H | H | C | R | N | C | G | Y | V | L |
Template Known Secondary structure |   |
T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
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. | . | . | . | 40 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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