|   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | M | N | L | V | T | S | Q | G | V | G | Q | S | I | G | S | V | T | I | T | E | T | D | K | G | L | E | F | S | P | D | L | K | A | . |
. |
. |
L | P | P | G | E | H | G | F | H | I | H | A | K | G | S | C | Q | P | A | T | K | D | G | K | A | S | A | A | E | S | A | G | G | H | L | D | P | Q | N | T | G | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |
|   |
| . | . | . |
|
|
|
|   |
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   | . | . | . |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |
|
Template Sequence |   |
Q | S | L | T | S | T | L | T | A | P | D | G | T | K | V | A | T | A | K | F | E | F | A | N | G | Y | A | T | V | T | I | A | T | T | G | V | G | K | L | T | P | G | F | H | G | L | H | I | H | Q | V | G | K | C | E | P | N | S | V | . |
. |
. |
A | P | T | G | G | A | P | G | N | F | L | S | A | G | G | H | Y | H |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S | S | S | S |
| S |  |  |  |
|  |  |  |  | S | S |
|
|
|
| S | S | B |
| . | . | . |
| T | T |
|
| S |
| B | T | T | G | G | G |
| S | B |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 160 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
H | E | G | P | E | G | A | G | H | L | G | D | L | P | A | L | V | V | N | N | D | G | K | A | T | D | A | V | I | A | P | R | L | K | . |
. |
S | L | D | E | I | K | D | K | A | L | M | V | H | V | G | G | D | N | M | S | D | Q | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | P | L | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   | . | . |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
Template Sequence |   |
V | P | G | H | T | G | T | P | A | S | G | D | L | A | S | L | Q | V | R | G | D | G | S | A | M | L | V | T | T | T | D | A | F | T | M | D | D | L | L | S | G | A | K | T | A | I | I | I | H | A | G | A | D | N | F | A | N | I | P | P | E | R | Y | V | Q | V | N | G | T | P | G | P | D | E | T | T | L | T | T | G |
Template Known Secondary structure |   |
| T | T |
|
| S | S | S |
| T | T | B |
|
|
|  |  |  |
| T | T | S |
|
|  |  |  |  |  |  | S | S |
|
|  |  |  |  |  | S | T | T |
|
|  |  |  |  |  | S | S |
|
|
| T | T |
|
|
| T | T | T |
| B |
| T | T | S |
| B | S |
|
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | G | E | R | Y | A | C | G | V | I | K |
Query Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|
|
|   |
Template Sequence |   |
D | A | G | K | R | V | A | C | G | V | I | G |
Template Known Secondary structure |   |
T |
|
| S |  |  |  |  |  |  | S | B |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . |
  |