Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD1
Confidence100.00%DateThu Jan 5 11:28:47 GMT 2012
Rank5Aligned Residues147
% Identity29%Templated1pzsa_
SCOP infoImmunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like
Resolution1.63

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50........ .60.........70.........80.........90.........100
Predicted Secondary structure 











...



































Query SS confidence 


































. . .









































Query Sequence  VEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKA. . . LPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGK
Query Conservation             
   
 
 
 
   

 
   
 
...



 

 



 
 

            




 

     
Alig confidence 


































...




















...

















Template Conservation      
 
    
  

 
 
 
      
 
   
   
 

 






 


  
  ...     




 

    
Template Sequence  QSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSV. . . APTGGAPGNFLSAGGHYH
Template Known Secondary structure 

TTS
TTSSSSSS
S
SS



SSB
...
TT

S
BTTGGG
SB

Template Predicted Secondary structure 




























...

















Template SS confidence 















































































   1........10.........20.........30.........40.........50......... 60.........70.......
 
   101........110.........120.........130.... .....140.........150....... ..160.
Predicted Secondary structure 























..
















.................



Query SS confidence 

































. .






















. . . . . . . . . . . . . . . . .



Query Sequence  HEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLK. . SLDEIKDKALMVHVGGDNMSDQP. . . . . . . . . . . . . . . . . KPLG
Query Conservation            





     
          
 ..    
 







  

     .................   
Alig confidence 

































..






















.................



Template Conservation 
       
 


 

 
  

 
          
 
   
 







  

    
           
    
  

Template Sequence  VPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTG
Template Known Secondary structure 
TT

SSS
TTB



TTS

SS

STT

SS


TT


TTT
B
TTS
BS

T
Template Predicted Secondary structure 




























































Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   162.......170...
Predicted Secondary structure 




Query SS confidence 











Query Sequence  GGGERYACGVIK
Query Conservation   

 






 
Alig confidence 











Template Conservation 


 






 
Template Sequence  DAGKRVACGVIG
Template Known Secondary structure  T

SSB
Template Predicted Secondary structure 



Template SS confidence 











   158.160.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions