Job Description P0AGD1 Confidence 4.72% Date Thu Jan 5 11:28:47 GMT 2012 Rank 83 Aligned Residues 55 % Identity 16% Template d1nkga1 SCOP info Prealbumin-like Starch-binding domain-like Rhamnogalacturonase B, RhgB, middle domain Resolution 1.50

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		Q	A	A	S	E	K	V	E	M	N	L	V	T	S	Q	G	V	G	Q	S	I	G	S	V	T	I	T	E	T	D	K	G	L	E	F	.	.	.	.	.	.	S	P	D	L	K	A	L	P	P	G	E	H	G	F	H	I	H	A	K	G
Query Conservation																																					.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	S	G	R	G	K	V	A	G	T	A	S	G	A	D	S	S	M	D	W	V	V	H	W	Y	N	D	A	A	Q	Y	W	T	Y	T	S	S	S	G	S	F	T	S	P	A	M	K	P	G	T	Y	T	M	V	Y	Y	Q	G	E
Template Known Secondary structure				G	G	G		B								S	S		T	T	S									S	S									T	T								B		S										T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions