Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD1
Confidence100.00%DateThu Jan 5 11:28:47 GMT 2012
Rank9Aligned Residues142
% Identity26%Templated1do5a_
SCOP infoImmunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like
Resolution2.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40......... 50.........60.........70.........80.........90.........100
Predicted Secondary structure 












.




































Query SS confidence 



























.


















































Query Sequence  EKVEMNLVTSQGVGQSIGSVTITETDKG. LEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGK
Query Conservation               
   
 
 
 
   
.
 
   
 




 

 



 
 

            




 

     
Alig confidence 



























.


























........















Template Conservation      



       
 
 
 
 
     
 
   
 

  
 
  



 
    ........ 
 







    
Template Sequence  QNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTN. . . . . . . . NCNSCGNHFNPDGASH
Template Known Secondary structure 


B
SSS
TTS

SS



TT........GGGTT
SB

TT



Template Predicted Secondary structure 

























........







Template SS confidence 















































































   84.....90.........100.........110.........120.........130......... 140.........150.....
 
   101........110.........120.........130.........140.........150.... .....160.........170..
Predicted Secondary structure 





































....










Query SS confidence 





















































. . . .

















Query Sequence  HEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMS. . . . DQPKPLGGGGERYACGVI
Query Conservation            





     
          
     
 







  

  ....      
 

 






Alig confidence 

































.


















....

















Template Conservation    
       





     
            .
  








   

        
   
 

 






Template Sequence  GGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLK. VWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII
Template Known Secondary structure 

TT
SSS
TT
TTSSS

.TTSSS


TT
S
STTTTTTTT



Template Predicted Secondary structure 























.


























Template SS confidence 











































































   156...160.........170.........180......... 190.........200.........210.........220.........230
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions