Job Description P0AGD1 Confidence 100.00% Date Thu Jan 5 11:28:47 GMT 2012 Rank 26 Aligned Residues 119 % Identity 34% Template c3hogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase [cu-zn], chloroplastic; PDBTitle: metal-free tomato chloroplast superoxide dismutase Resolution 1.85 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		E	K	V	E	M	N	L	V	T	S	Q	G	V	G	Q	S	I	G	S	V	T	I	T	E	T	D	K	G	.	L	E	F	S	P	D	L	K	A	L	P	P	G	E	H	G	F	H	I	H	A	K	G	S	C	Q	P	A	T	K	D	G	K	A	S	A	A	E	S	A	G	G	H	L	D	P	Q	N	T	G	K
Query Conservation																														.
Alig confidence												.																		.																												.	.	.	.	.	.	.	.
Template Conservation												.																																														.	.	.	.	.	.	.	.
Template Sequence		A	T	K	K	A	V	A	V	L	K	.	G	N	S	N	V	E	G	V	V	T	L	S	Q	D	D	D	G	P	T	T	V	N	V	R	I	T	G	L	A	P	G	L	H	G	F	H	L	H	E	Y	G	D	T	T	N	.	.	.	.	.	.	.	.	G	C	M	S	T	G	A	H	F	N	P	N	K	L	T	H
Template Known Secondary structure												.		S	S	S										S	T	T	S										S			S									S					T	T	.	.	.	.	.	.	.	.	G	G	G	G	G		S	B			T	T	T	T
Template Predicted Secondary structure												.																																														.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		H	E	G	P	E	G	A	G	H	L	G	D	L	P	A	L	V	V	N	N	D	G	K	A	T	D	A	V	I	A	P	.	.	R	L	K	S	L	D	E	I	K	D	K	A	L	M	V	H	V	G	G	D	N	M	S	D	Q	P	K	P	L	G	G	G	G	E	R	Y	A	C	G	V	I
Query Conservation																																	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	H	A	G	D	L	G	N	I	V	A	N	A	D	G	V	A	E	V	T	L	V	D	N	Q	I	P	L	T	G	P	N	S	V	V	G	R	A	L	V	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	G	R	L	A	C	G	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.		T	T	B								T	T	S									S	S			S	S	S	T	T			T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions