Job Description P0AGD1 Confidence 100.00% Date Thu Jan 5 11:28:47 GMT 2012 Rank 18 Aligned Residues 144 % Identity 28% Template c2e47A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:time interval measuring enzyme time; PDBTitle: crystal structure analysis of the clock protein ea4 (glycosylation2 form) Resolution 2.11 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	A	S	E	K	V	E	M	N	L	V	T	S	Q	G	V	G	Q	S	I	G	S	V	T	I	T	E	T	D	K	G	.	L	E	F	S	P	D	L	K	A	L	P	P	G	E	H	G	F	H	I	H	A	K	G	S	C	Q	P	A	T	K	D	G	K	A	S	A	A	E	S	A	G	G	H	L	D	P	Q	N
Query Conservation																																	.
Alig confidence																.	.																.																												.	.	.	.	.	.	.	.
Template Conservation																.	.																																												.	.	.	.	.	.	.	.
Template Sequence		G	F	T	T	P	S	R	A	I	A	V	L	S	T	.	.	E	T	I	R	G	N	I	T	F	T	Q	V	Q	D	G	K	V	H	V	Q	G	G	I	T	G	L	P	P	G	E	Y	G	F	H	V	H	E	K	G	D	L	S	G	.	.	.	.	.	.	.	.	G	C	L	S	T	G	S	H	F	N	P	E	H
Template Known Secondary structure			S													.	.	S	S											G	G	G										S	S		S									S					T	T	.	.	.	.	.	.	.	.	G	G	G	G	G		S	B			T	T
Template Predicted Secondary structure																.	.																																												.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																				.	.																												.	.	.	.
Query SS confidence																																				.	.																												.	.	.	.
Query Sequence		T	G	K	H	E	G	P	E	G	A	G	H	L	G	D	L	P	A	L	V	V	N	N	D	G	K	A	T	D	A	V	I	A	P	.	.	R	L	K	S	L	D	E	I	K	D	K	A	L	M	V	H	V	G	G	D	N	M	S	D	Q	P	K	.	.	.	.	P	L	G	G	G	G	E	R	Y	A	C	G	V
Query Conservation																																				.	.																												.	.	.	.
Alig confidence																																				.	.																												.	.	.	.
Template Conservation
Template Sequence		K	D	H	G	H	P	N	D	V	N	R	H	V	G	D	L	G	N	V	V	F	D	E	N	H	Y	S	R	I	D	L	V	D	D	Q	I	S	L	S	G	P	H	G	I	I	G	R	A	V	V	L	H	E	K	A	D	D	Y	G	K	S	D	H	P	D	S	R	K	T	G	N	A	G	G	R	V	A	C	G	V
Template Known Secondary structure							T	T	S	S	S	S		T	T									T	T	S									S	S		B	S	S	S	T	T	B		T	T	S						S	S				T	T		S	S	S	T	T					T	T			S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		172
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		153

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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