Return to main results Retrieve Phyre Job Id

Job DescriptionP75860
Confidence99.95%DateThu Jan 5 12:15:09 GMT 2012
Rank1Aligned Residues149
% Identity36%Templatec3jwnL_
PDB info PDB header:protein binding/cell adhesionChain: L: PDB Molecule:protein fimf; PDBTitle: complex of fimc, fimf, fimg and fimh
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60. ........70.........80.........90.........100.
Predicted Secondary structure 
















.


















Query SS confidence 






































.







































Query Sequence  HDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH. GNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLS
Query Conservation      
   
 
   

 
        
 

 
       .        
 
 
                           
Alig confidence 






































.







































Template Conservation 




   
 
   

 
        
 

 
                
 
    
        
 
 
           
Template Sequence  ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
Template Known Secondary structure 















GGGSS








GGG

STT
B



TT



B
SS
TTS
Template Predicted Secondary structure 



































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   102.......110.........120.........130. ........140.........150.........160.........170.
Predicted Secondary structure 

















....











Query SS confidence 





























. . . .







































Query Sequence  IESGTDAASGLAIAILDDAKILIPLNQASK. . . . DYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
Query Conservation         
 



 
       
  
    ....              
           
   
 

  
 
 
Alig confidence 





























....







































Template Conservation         
 



 
                                 
        
  
   
     
 

Template Sequence  LENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
Template Known Secondary structure 



TTB
BS
TTS
B

TT

GGGS



SSS
SSSS
B

B





Template Predicted Secondary structure 
































Template SS confidence 









































































   81........90.........100.........110.........120.........130.........140.........150....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions