Return to main results Retrieve Phyre Job Id

Job DescriptionP75860
Confidence99.88%DateThu Jan 5 12:15:09 GMT 2012
Rank9Aligned Residues130
% Identity18%Templatec3bfwA_
PDB info PDB header:structural protein/structural proteinChain: A: PDB Molecule:protein fimg; PDBTitle: crystal structure of truncated fimg (fimgt) in complex with the donor2 strand peptide of fimf (dsf)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60. ........70.........80.........90.........100.........110...
Predicted Secondary structure 













.

























Query SS confidence 


























.



















































Query Sequence  RNTCVLAQDSKQINVQLGDVSLTRFSH. GNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLA
Query Conservation    

 
        
 

 
       .        
 
 
                                  
 


Alig confidence 






..

















.


































.....











Template Conservation 
  
 
 ..     



 
        
       
 
 
  
            
      .....       
 


Template Sequence  AKPCTVS. . TTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTG. . . . . YYKNQGTAQNIQ
Template Known Secondary structure 



S..
S









GGGS
STT
B





TT



B
TTS.....S

SS
SS
Template Predicted Secondary structure 



..






























.....









Template SS confidence 















































































   13...... 20.........30.........40.........50.........60.........70... ......80.....
 
   114.....120.........130... ......140.........150.........160.........170.
Predicted Secondary structure 










.











Query SS confidence 



















.





































Query Sequence  IAILDDAKILIPLNQASKDY. SLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
Query Conservation 
 
       
  
      .            
           
   
 

  
 
 
Alig confidence 



















.





































Template Conservation 
 
       
                      
        
  
   
  
  
 

Template Sequence  LELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS
Template Known Secondary structure  TTS
B

TT

BTTTTB
SSS


SS






Template Predicted Secondary structure 






















Template SS confidence 


























































   86...90.........100.........110.........120.........130.........140....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions