Job Description P30863 Confidence 26.97% Date Thu Jan 5 11:46:39 GMT 2012 Rank 57 Aligned Residues 212 % Identity 15% Template d3bofa2 SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 1.70

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		D	D	V	V	I	S	S	V	I	T	A	L	E	L	G	Y	R	A	I	D	T	A	Q	I	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	A	A	V	G	Q	A	I	A	E	S	G	V	P	R	H	E	L	Y	I	T	T	K	I	W	I	E	.	.	.	.	.	.	.	.	N	L	S	K
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																								.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		P	D	V	V	L	K	V	H	R	S	Y	I	E	S	G	S	D	V	I	L	T	N	.	T	F	G	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F
Template Known Secondary structure														T	T	T		S					S	.		T	T		S					G	G	G	T		G	G	G																	T	T	S										S			B	T	T	T	S	S	B
Template Predicted Secondary structure																								.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		D	K	L	I	P	S	L	K	E	S	L	Q	K	L	R	T	D	Y	V	D	L	T	L	I	H	W	P	S	P	N	D	E	V	S	V	E	E	F	M	Q	A	L	L	E	A	K	K	Q	G	L	T	R	E	I	G	I	S	N	F	.	.	.	.	.	.	.	.	T	I	P	L	M	E	K	A	I	A	A	V	G
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		E	E	F	Y	E	N	F	R	E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	.	.	.	.	.	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D
Template Known Secondary structure																		T	T		S					.	.	.	.	.																					S	S	S										T	T	S			T	T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure														.	.																																																																		.
Query SS confidence														.	.																																																																		.
Query Sequence		A	E	N	I	A	T	N	Q	I	E	L	S	.	.	P	Y	L	Q	N	R	K	V	V	A	W	A	K	Q	H	G	I	H	I	T	S	Y	M	T	L	A	Y	G	K	A	L	K	D	E	V	I	A	R	I	A	A	K	H	N	A	T	P	A	Q	V	I	L	A	W	A	M	G	E	G	Y	S	V	I	P	S	.
Query Conservation														.	.																																																																		.
Alig confidence														.	.																																												.	.	.										.										.
Template Conservation																																																											.	.	.										.
Template Sequence		E	L	D	I	D	A	L	G	I	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	K	P	I	V	E	N	G	K	T	V	Y	P	L	K	P	H	D	.	.	.	F	A	V	H	I	D	S	Y	Y	.	E	L	G	V	N	I	F	G	G	C
Template Known Secondary structure		T	S	S		S						S	S	S															T			S								S	S	S					T	T											.	.	.			T	T						.		T	T		S
Template Predicted Secondary structure																																																											.	.	.										.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.
			222	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	T	K	R	K	N	L	E	S	N	L	K	A	Q	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		C	G	T	T	P	E	H	V	K	L	F	R	K	V	L	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions