Job Description P30863 Confidence 26.43% Date Thu Jan 5 11:46:39 GMT 2012 Rank 58 Aligned Residues 53 % Identity 17% Template d1i27a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain C-terminal domain of the rap74 subunit of TFIIF Resolution 1.02

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	A	Q	I	Y	D	.	N	E	A	A	V	G	Q	A	I	A	E	S	G	V	P	R	H	E	L	Y	I	T	T	K	I	W	I	E	N	L	S	K	D	K	L	I	P	S	L	K	E	S	L	Q	K	L	R
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		G	S	G	D	V	Q	V	T	E	D	A	V	R	R	Y	L	T	R	K	P	M	T	T	K	D	L	L	K	K	F	Q	T	K	K	T	G	L	S	S	E	Q	T	V	N	V	L	A	Q	I	L	K	R	L	N
Template Known Secondary structure		G				S	S													S		B								T	S
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions