Job Description P30863 Confidence 79.80% Date Thu Jan 5 11:46:39 GMT 2012 Rank 42 Aligned Residues 170 % Identity 10% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.
Predicted Secondary structure									.																																.																									.	.	.	.	.	.	.	.
Query SS confidence									.																																.																									.	.	.	.	.	.	.	.
Query Sequence		I	P	A	F	G	L	G	.	T	F	R	L	K	D	D	V	V	I	S	S	V	I	T	A	L	E	L	G	Y	R	A	I	D	T	A	Q	I	Y	D	.	N	E	A	A	V	G	Q	A	I	A	E	S	G	V	P	R	H	E	L	Y	I	T	T	K	.	.	.	.	.	.	.	.	I	W	I	E	N	L	S	K
Query Conservation									.																																.																									.	.	.	.	.	.	.	.
Alig confidence									.																																.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	P	R	F	A	A	N	L	S	T	M	F	N	E	V	P	F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	L	F	P	Y	D	F	D	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M	A	A	I	S	G	R	E
Template Known Secondary structure									T	T	T	S		T	T	S												T	T		S					S			T	T	S												T	T											S		T	T	T	T			B		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.
Predicted Secondary structure														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	L	I	P	S	L	K	E	S	L	Q	.	.	.	K	L	R	T	D	Y	V	D	L	T	L	I	H	W	P	S	P	N	D	E	V	S	V	E	E	F	M	Q	A	L	L	E	A	K	K	Q	G	L	T	R	E	I	G	I	S	N	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	L	M
Query Conservation														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	I	T	E	G	L	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y	F	I	V	H	Q	L	E	A
Template Known Secondary structure																		T	T								B		B		T	T	S																					G	G	G	T										T	T	T	S	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	I	A	A	V	G	A	E	N	I	A	T	N	Q	I	E	L	S	P	Y	L	Q	N	R	K	V	V	A	W	A	K	Q	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	L	V	K	R	V	N	R	P	N	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	G	D	L	T	R	L	I	E	K	M	N
Template Known Secondary structure											T	T														T										T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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