Job Description P30863 Confidence 100.00% Date Thu Jan 5 11:46:39 GMT 2012 Rank 36 Aligned Residues 257 % Identity 25% Template c3n2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the glycerol dehydrogenase akr11b4 from gluconobacter2 oxydans Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																											.	.	.																											.	.	.
Query SS confidence																.	.	.	.	.	.	.	.																											.	.	.																											.	.	.
Query Sequence		M	A	I	P	A	F	G	L	G	T	F	R	L	K	.	.	.	.	.	.	.	.	D	D	V	V	I	S	S	V	I	T	A	L	E	L	G	Y	R	A	I	D	T	A	Q	I	Y	D	.	.	.	N	E	A	A	V	G	Q	A	I	A	E	S	G	V	P	R	H	E	L	Y	I	T	T	K	I	W	.	.	.
Query Conservation																.	.	.	.	.	.	.	.																											.	.	.																											.	.	.
Alig confidence																.	.	.	.	.	.	.	.																											.	.	.													.	.	.												.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		T	P	L	S	R	V	A	L	G	T	W	A	I	G	G	W	M	W	G	G	P	D	D	D	N	G	V	R	T	I	H	A	A	L	D	E	G	I	N	L	I	D	T	A	P	V	Y	G	F	G	H	S	E	E	I	V	G	R	A	L	A	E	K	.	.	.	P	N	K	A	H	V	A	T	K	L	G	L	H	W
Template Known Secondary structure		S				S						T	T	S	S		S	S	S		S	T	T														T	T								T	T	G	G	G	G													S	.	.	.
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.
												67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	E	N	L	S	K	D	K	L	I	P	S	L	K	E	S	L	Q	K	L	R	T	D	Y	V	D	L	T	L	I	H	W	P	S	P	N	D	E	V	S	V	E	E	F	M	Q	A	L	L	E	A	K	K	Q	G	L	T	R	E	I	G	I	S	N	F	T	I	P	L	M
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																					.	.
Template Conservation																																																.	.
Template Sequence		V	G	E	D	E	K	N	M	K	V	F	R	D	S	R	P	A	R	I	R	K	E	V	E	D	S	L	R	R	L	R	V	E	T	I	D	L	E	Q	I	H	W	P	D	D	K	.	.	T	P	I	D	E	S	A	R	E	L	Q	K	L	H	Q	D	G	K	I	R	A	L	G	V	S	N	F	S	P	E	Q	M
Template Known Secondary structure			S	S	S	T	T	T																								T		S	S							S	S			T	T	.	.	S															T	T	S								S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	I	A	A	V	G	A	E	N	I	A	T	N	Q	I	E	L	S	P	Y	L	Q	N	R	K	V	V	A	W	A	K	Q	H	G	I	H	I	T	S	Y	M	T	L	A	Y	G	K	A	L	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		D	I	F	R	E	V	A	P	L	A	T	.	I	Q	P	P	L	N	L	F	E	R	T	I	E	K	D	I	L	P	Y	A	E	K	H	N	A	V	V	L	A	Y	G	A	L	C	R	G	L	L	T	G	K	M	N	R	D	T	T	F	P	K	D	D	L	R	S	N	D	P	K	F	Q	K	P	N	F	E	K	Y
Template Known Secondary structure								S					.				B		B	T	T	B		G	G	G	G	T									T						B		T	T	G	G	G	G	G	G	T				T	T					T	T	S	G	G	G	G		G	G	G	S	T	T
Template Predicted Secondary structure													.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.																													.
Query SS confidence		.	.	.	.																													.
Query Sequence		.	.	.	.	E	V	I	A	R	I	A	A	K	H	N	A	T	P	A	Q	V	I	L	A	W	A	M	G	E	G	Y	S	.	V	I	P	S	S	T	K	R	K	N	L	E	S	N	L	K	A	Q	N	L	Q	L	D	A	E	D	K	K	A	I	A	A	L	D	C	N	D	R	L	V	S	P	E	G	L	A	P
Query Conservation		.	.	.	.																													.
Alig confidence		.	.	.	.																													.																																					.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		L	A	A	M	D	E	F	E	K	L	A	E	K	R	G	K	S	V	M	A	F	A	V	R	W	V	L	D	Q	G	P	V	I	A	L	W	G	A	R	K	P	G	Q	V	S	G	V	K	D	V	F	G	W	S	L	T	D	E	E	K	K	A	V	D	D	I	L	A	R	.	.	.	H	V	P	N	P	I	D	P
Template Known Secondary structure															T	T													T	T	T	T								S	S	G	G	G	G	T	T					S	S																		.	.	.		S						S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.
		265	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		324	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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