Job Description P30863 Confidence 100.00% Date Thu Jan 5 11:46:39 GMT 2012 Rank 40 Aligned Residues 251 % Identity 30% Template c3ln3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution Resolution 1.18 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		M	A	I	P	A	F	G	L	G	T	F	R	L	K	D	D	V	V	I	S	S	V	I	T	A	L	E	L	G	Y	R	A	I	D	T	A	Q	I	Y	D	N	E	A	A	V	G	Q	A	I	A	E	S	.	G	V	P	R	H	E	L	Y	I	T	T	K	I	W	I	E	N	L	S	K	D	K	L	I	P	S	L
Query Conservation																																																						.
Alig confidence																	.																																					.																									.	.	.
Template Conservation																	.																																																														.	.	.
Template Sequence		H	L	I	P	A	L	G	F	G	T	Y	P	E	V	P	.	S	S	L	E	A	A	C	L	A	L	D	V	G	Y	R	H	V	D	T	A	Y	A	Y	Q	V	E	E	E	I	G	Q	A	I	Q	S	I	A	G	V	V	R	E	D	L	F	V	T	T	K	L	W	C	T	C	F	R	P	E	L	V	P	.	.	.
Template Known Secondary structure					B	S	S										.													T								G	G	G	T																		T	T									G	G	G		S	G	G	G			.	.	.
Template Predicted Secondary structure																	.																																																														.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	S	L	Q	K	L	R	T	D	Y	V	D	L	T	L	I	H	W	P	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	E	V	S	V	E	E	F	M	Q	A	L	L	E	A	K	K	Q	G	L	T	R	E	I	G	I	S	N	F	T	I	P	L	M	E	K	A	I	A	A	V	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																									.
Template Conservation		.																																																					.	.																									.
Template Sequence		.	A	L	E	S	L	L	Q	L	D	Y	V	D	L	Y	I	X	H	Y	P	V	P	X	S	G	D	N	D	F	P	V	N	E	Q	G	S	L	L	D	T	V	D	F	C	D	T	W	E	R	L	E	E	C	.	.	D	A	G	L	V	S	I	G	V	S	N	F	N	H	R	Q	L	E	R	I	L	N	P	G	.
Template Known Secondary structure		.									S			S					S		S						S		S	S				T	T																				.	.			S								S														.
Template Predicted Secondary structure		.																																																					.	.																									.
Template SS confidence
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		A	E	N	I	A	T	N	Q	I	E	L	S	P	Y	L	Q	N	R	K	V	V	A	W	A	K	Q	H	G	I	H	I	T	S	Y	M	T	L	A	Y	G	K	A	L	K	D	E	V	.	.	.	.	.	.	.	I	A	R	I	A	A	K	H	N	A	T	P	A	Q	V	I	L	A	W	A	M	G	E	G	Y	S
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence		.																	.							.																							.	.	.	.	.	.	.
Template Conservation		.																	.							.
Template Sequence		.	L	Y	P	V	C	N	Q	V	E	C	H	L	Y	L	N	Q	.	R	L	L	D	Y	C	.	E	S	D	I	V	L	V	A	Y	G	A	L	G	T	Q	R	Y	E	W	V	D	Q	N	S	P	V	L	L	N	D	P	V	L	C	D	V	A	N	R	S	P	A	L	I	A	L	R	Y	L	I	Q	R	G	I	V
Template Known Secondary structure		.											B	T	T	B			.							.										S	T	T	S							S		T	T	S			G	G	G																							T	T
Template Predicted Secondary structure		.																	.							.
Template SS confidence
			182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	P	S	S	T	K	R	K	N	L	E	S	N	L	K	A	Q	N	L	Q	L	D	A	E	D	K	K	A	I	A	A	L	D	C	N	D	R	L	V	S	P	E	G	L	A	P	E
Query Conservation
Alig confidence										.																				.								.
Template Conservation										.																				.								.
Template Sequence		P	L	A	Q	S	F	E	N	.	E	X	R	E	N	L	Q	V	F	G	F	Q	L	S	P	E	D	X	T	.	L	D	G	L	N	N	F	.	R	Y	L	P	A	E	F	L	V	D	H
Template Known Secondary structure										.						G	G	G	G	G					T	T	T			.	G	G	G	G				.		S				G	G	G		S	S
Template Predicted Secondary structure										.																				.								.
Template SS confidence
		267	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions