Return to main results Retrieve Phyre Job Id

Job DescriptionP30863
Confidence9.46%DateThu Jan 5 11:46:39 GMT 2012
Rank94Aligned Residues144
% Identity17%Templatec2fknC_
PDB info PDB header:lyaseChain: C: PDB Molecule:urocanate hydratase; PDBTitle: crystal structure of urocanase from bacillus subtilis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10 .........20.........30.... ..... 40.........50.. .......60........
Predicted Secondary structure 


.







..




..........


..











Query SS confidence 






.























. .




. . . . . . . . . .












. .















Query Sequence  PAFGLGT. FRLKDDVVISSVITALELGYRAID. . TAQIY. . . . . . . . . . DNEAAVGQAIAES. . GVPRHELYITTKIWIE
Query Conservation 
 

 

.           
  
   

  

..

  
..........


  

 

   ..   
    
 

    
Alig confidence 






.























..




..........












..















Template Conservation 







 


 

 
  
  
   

  








 


 






 

   


    
 
 

  







Template Sequence  PRVLLANSVLVPKWADWEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGM
Template Known Secondary structure 
SS


GGG
STT


B
TTTTTTT


TTSTT

TT


STT
Template Predicted Secondary structure 

































Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   6970........ .80.........90.........100.........110.........120.........130.......
Predicted Secondary structure 
...........
























Query SS confidence 









. . . . . . . . . . .


























































Query Sequence  NLSKDKLIPS. . . . . . . . . . . LKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIPLME
Query Conservation            ...........   

  
  
 


  

                
  
   
 
   


        
Alig confidence 









...........













.........



































Template Conservation 




 
  
 


 

 


   
 

   
 

......... 

  

 

     
       


  





 
Template Sequence  GGAQPLSVTMNEGVVIAVEVDEKRIDKRIETKYCD. . . . . . . . . RKTASIEEALAWAEEAKLAGKPLSIALLGNAAEVHH
Template Known Secondary structure  TTTT
S
TTS
S.........S
T

S
Template Predicted Secondary structure 











.........







Template SS confidence 















































































   175....180.........190.........200......... 210.........220.........230.........240.....
 
   138.140.........150......
Predicted Secondary structure 






Query SS confidence 


















Query Sequence  KAIAAVGAENIATNQIELS
Query Conservation                     
Alig confidence 


















Template Conservation   
       

 




 
Template Sequence  TLLNRGVKIDIVTDQTSAH
Template Known Secondary structure  TTT


S


S
TT
Template Predicted Secondary structure 











Template SS confidence 


















   246...250.........260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions