Job Description P30863 Confidence 10.06% Date Thu Jan 5 11:46:39 GMT 2012 Rank 92 Aligned Residues 213 % Identity 18% Template c1x7fA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:outer surface protein; PDBTitle: crystal structure of an uncharacterized b. cereus protein Resolution 2.30 Å

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		5	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure									.	.																																.
Query SS confidence									.	.																																.
Query Sequence		A	F	G	L	G	T	F	.	.	R	L	K	D	D	V	V	I	S	S	V	I	T	A	L	E	L	G	Y	R	A	I	D	T	A	Q	I	Y	D	N	E	.	A	A	V	G	Q	A	I	A	E	S	G	V	P	R	H	E	L	Y	I	T	T	K	I	W	I	E	N	L	S	K	D	K	L	I	P	S	L	K	E
Query Conservation									.	.																																.
Alig confidence									.	.																																.														.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.																.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	G	I	S	L	Y	P	E	H	S	T	K	E	K	D	M	A	Y	I	S	A	A	A	R	H	G	F	S	R	I	F	T	C	L	L	S	V	A	E	F	K	E	I	I	N	H	A	K	D	N	N	M	E	.	V	I	L	D	V	A	P	A	V	F	Y	S	D	L	S	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									G	G	G	S														T	T	T																								T	T			.							T	T						T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Q	K	L	R	T	D	Y	V	D	L	T	L	I	H	W	P	S	P	N	D	E	V	S	V	E	E	F	M	Q	A	L	L	E	A	K	K	Q	G	L	T	R	E	I	G	I	S	N	F	T	I	P	L	M	E	K	A	I	A	A	V	G	A	E	N	I	A	T	N	Q	I	E	L	S	P	Y	L	Q	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.																														.
Template Conservation														.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		F	F	A	E	L	G	A	D	G	I	R	L	.	.	.	.	.	.	.	.	.	.	D	V	G	F	D	G	L	T	E	A	K	M	T	N	N	P	Y	G	L	K	I	E	L	N	V	S	N	D	I	.	A	Y	L	E	N	I	L	S	H	Q	A	N	K	S	A	L	I	G	C	H	N	F	Y	P	Q	K	F	T
Template Known Secondary structure							T		S					.	.	.	.	.	.	.	.	.	.	S	S			S	S							T	T		T	T								T	T	S		S	.	S						T	T	S	S			G	G	G								B		S	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
									162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.																												.	.																														.	.
Query SS confidence		.	.	.	.	.	.	.																												.	.																														.	.
Query Sequence		.	.	.	.	.	.	.	R	K	V	V	A	W	A	K	Q	H	G	I	H	I	T	S	Y	M	T	L	A	Y	G	K	A	L	K	.	.	D	E	V	I	A	R	I	A	A	K	H	N	A	T	P	A	Q	V	I	L	A	W	A	M	G	E	G	Y	S	.	.	V	I	P	S	S	T	K	R	K	N	L	E	S
Query Conservation		.	.	.	.	.	.	.																												.	.																														.	.
Alig confidence		.	.	.	.	.	.	.																												.	.																														.	.					.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	L	P	Y	D	Y	F	I	R	C	S	E	R	F	K	K	H	G	I	R	S	A	A	F	I	T	S	H	V	A	N	I	G	P	W	D	I	N	D	G	L	C	T	L	E	E	H	R	N	L	P	I	E	V	Q	A	K	H	L	W	A	T	G	L	I	D	D	V	I	I	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	B															T	T										S	S			B		S	S	S			S			B	S	B	G	G	G	T	T	S												T	T	S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	K	A	Q	N	L	Q	L	D	A	E	D	K	K	A	I	A	A	L	D	C	N
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	N	A	Y	A	S	E	E	E	L	E	K	L	G	N	L	N	R	Y
Template Known Secondary structure		.	.	.	.	.	S	B													S		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions