Job Description P39177 Confidence 41.73% Date Thu Jan 5 11:58:24 GMT 2012 Rank 24 Aligned Residues 113 % Identity 14% Template c3tvsA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cryptochrome-1; PDBTitle: structure of full-length drosophila cryptochrome Resolution 2.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	V	R	H	A	E	F	L	A	Q	D	D	G	V	I	H	L	L	H	V	L	P	G	S	A	S	L	S	L	H	R	F	A	A	D	V	R	R	F	E	E	H	L	Q	H	E	A	Q	E	R	L	Q	T	M	V	S	H	F	T	I	D	P	S	R	.	I	K	Q	H	V	R	F	G	S	V	R	D	E	V	N
Query Conservation																																																																		.
Alig confidence																																			.	.	.	.	.	.	.	.																								.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		A	L	L	A	A	L	A	D	K	D	Q	G	I	A	L	I	P	V	F	I	F	D	G	E	S	A	G	T	K	N	V	G	Y	.	.	.	.	.	.	.	.	N	R	M	R	F	L	L	D	S	L	Q	D	I	D	D	Q	L	Q	A	A	T	D	G	R	G	R	L	L	V	F	E	G	E	P	A	Y	I	F	R
Template Known Secondary structure					T	T	T	G	G	G	T	T	T		B									S	S	S	S		S	T	T				.	.	.	.	.	.	.	.																	G	G	G	S		S	S	S	S							S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	E	E	L	G	A	D	V	V	V	I	G	S	R	N	P	S	I	S	T	H	L	L	G	S	N	A	S	S	V	I	R	H	A	N	L	P	V	L	V	V
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		R	L	H	E	Q	V	R	L	H	R	I	C	I	E	Q	D	C	E	P	I	W	N	E	R	D	E	S	I	.	R	S	L	C	R	E	L	N	I	D	F	V	E	K
Template Known Secondary structure																				G	G	G								.							S	S
Template Predicted Secondary structure																														.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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