Return to main results Retrieve Phyre Job Id

Job DescriptionP39177
Confidence19.29%DateThu Jan 5 11:58:24 GMT 2012
Rank31Aligned Residues87
% Identity22%Templatec1pklB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein (pyruvate kinase); PDBTitle: the structure of leishmania pyruvate kinase
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  SLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSN
Query Conservation                                                    
          


             


Alig confidence 



































































........



Template Conservation 
 
 



 
  
  
   

                        


  

  
    
 



 
 ........

 
Template Sequence  AKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSN. . . . . . . . TGRS
Template Known Secondary structure  T
S


S
SS

T
S

S........SS
Template Predicted Secondary structure 
















........

Template SS confidence 















































































   334.....340.........350.........360.........370.........380.........390.........400. ....
 
   127..130..... ....140.
Predicted Secondary structure 

.

Query SS confidence 








.





Query Sequence  ASSVIRHAN. LPVLVV
Query Conservation 
  

  
 . 




Alig confidence 








.





Template Conservation 
  

  

  

 
 
Template Sequence  ARLVAKYRPNCPIVCV
Template Known Secondary structure  T

SS
Template Predicted Secondary structure 





Template SS confidence 















   406...410.........420.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions